Pseudomonas viridiflava: CFBP1590__4304
Help
Entry
CFBP1590__4304 CDS
T06554
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CFBP1590__4304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvd03021
]
CFBP1590__4304
Transcription machinery [BR:
pvd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CFBP1590__4304
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_24
HTH_20
GerE
HTH_23
HTH_Crp_2
Xre-like-HTH
Crp
HTH_10
HTH_11
HTH_5
HTH_IclR
TnsD
HTH_40
DUF8658
HTH_36
HTH_38
Motif
Other DBs
NCBI-ProteinID:
SMS11890
LinkDB
All DBs
Position
I:4774637..4775140
Genome browser
AA seq
167 aa
AA seq
DB search
MHSTHPALTHTVDGLFRAHNAWLTGWLRRRLGCPHSAADLAQDTFIKVLGARDTQQIVEP
RAFLTTIARRVLCNHYRRQDLERAYYQALSELPESVAPSEEERAIILETLVELDQLLDGL
PGPVKSAFLMSQVDGLSHGEIASALGISIATVKRHLNKAALRCYFAL
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcacccaccctgctctcacccacaccgtcgacggcctgttccgggcgcataac
gcctggctgacgggctggttgcggcgcaggctcggctgtccgcacagtgccgcggatctg
gcgcaggacacgttcatcaaggtgctgggcgcgcgcgacacgcagcagatcgtcgagccg
cgcgcgttcctgaccaccatcgcccgacgcgtgctgtgcaatcactaccgacgtcaggat
ctggaacgcgcttattatcaggcgctgtccgaactgcccgagagcgtggcgccatccgaa
gaagaacgggcgatcattcttgaaacgctggtggaactggatcaattgctggatggcctt
ccaggcccggtgaaaagcgcgttcctgatgtcgcaggttgatggcctgagccatggcgaa
atcgccagcgcgttgggtatttccatcgcaacggtcaaacgccacctgaacaaggccgcc
ctgcgctgctacttcgccctatga
DBGET
integrated database retrieval system