Pseudomonas viridiflava: CFBP1590__4417
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Entry
CFBP1590__4417 CDS
T06554
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd00521
Streptomycin biosynthesis
pvd00523
Polyketide sugar unit biosynthesis
pvd00525
Acarbose and validamycin biosynthesis
pvd00541
Biosynthesis of various nucleotide sugars
pvd01100
Metabolic pathways
pvd01110
Biosynthesis of secondary metabolites
pvd01250
Biosynthesis of nucleotide sugars
Module
pvd_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CFBP1590__4417 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CFBP1590__4417 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CFBP1590__4417 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CFBP1590__4417 (rfbB)
00525 Acarbose and validamycin biosynthesis
CFBP1590__4417 (rfbB)
Enzymes [BR:
pvd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CFBP1590__4417 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
SMS12003
UniProt:
A0A0Q0FGF7
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All DBs
Position
I:4888692..4889792
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AA seq
366 aa
AA seq
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MSRTKVNILLKILVTGGAGFIGSAVIRHIISNTNDSVINVDKLTYAGNLESLQSVEDSER
YAFAHVDICDREAIDKVFQEHQPDAIMHLAAESHVDRSITGPSEFIQTNIIGTYTLLEAA
RAYWNQLDEARKSNFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVR
AWSRTYGLPTLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPIYGKGDQVRDWLYVEDH
ARALYKVVTEGEIGETYNIGGHNEKQNIEVVHTVCALLDQLRPDSAHLPHASLITYVQDR
PGHDLRYAIDASKIQRELGWVPEESFESGIRKTVEWYLNNPEWVAHVKSGSYQQWIDKNY
TARADK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
ttgtctcgaaccaaggtgaatattctcttgaagatcttagtaacaggtggcgctggtttc
attggctcggcagttatccgccatatcatttccaatacaaatgattcggtcatcaacgtc
gacaagctgacctatgcgggcaacctcgagtcgcttcaatcggttgaagacagcgagcgc
tatgcgtttgcgcacgtggacatctgtgaccgtgaagcgatcgacaaggtgttccaggaa
catcagcccgacgcaatcatgcacctggccgccgaatctcatgtagaccgctccatcacc
ggcccgtccgagttcatccagaccaacatcatcggcacttacacgctgcttgaagcggca
cgtgcctactggaaccagctggacgaagcacgcaagagcaacttccgtttccaccacatt
tcgactgacgaagtgtatggcgacctggaaggcccggaagaccttttcaccgaaacaaca
ccttatcagccaagctcgccctactcggccagcaaggcaagttccgaccacctggttcgt
gcctggagcagaacctatggtttgcctaccctggtcaccaactgctcgaacaactacggc
ccgtgccacttccctgagaagctgatcccgctgatcattctcaacgcgctggaaggcaag
ccgctgccgatctacggcaaaggcgatcaggttcgtgactggctgtacgtcgaagatcac
gcccgcgcactgtacaaggtcgtgaccgaaggcgagatcggcgagacctataacatcggt
ggccacaacgaaaagcagaacatcgaagtcgtccacacggtctgtgccctcctcgaccaa
ctgcgtccggattcggctcatctgccacacgcaagcctgatcacttacgttcaggaccgt
cctggccacgatctgcgctacgctatcgacgccagcaagatccagcgcgagctgggctgg
gttccggaagagagcttcgagtccggcatccgcaagacggtggagtggtacctcaacaat
ccagagtgggttgctcacgtgaaaagcggcagctaccagcaatggatcgacaagaactac
acagctcgcgccgataaataa
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integrated database retrieval system