Pseudomonas viridiflava: CFBP1590__4496
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Entry
CFBP1590__4496 CDS
T06554
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pvd
Pseudomonas viridiflava
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvd03016
]
CFBP1590__4496 (truB)
Enzymes [BR:
pvd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CFBP1590__4496 (truB)
Transfer RNA biogenesis [BR:
pvd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFBP1590__4496 (truB)
Prokaryotic type
CFBP1590__4496 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
SMS12082
UniProt:
A0A1Y6JTF3
LinkDB
All DBs
Position
I:complement(4991739..4992656)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKSYETMMQLGKTTTTGDSEGDVLLTRPVTVGRDDIDAALPAFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGDTARLSVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFSLAQTVTLEELEQVHADGGNEAVDRFLMPSDS
GLLDWPLLKFSEHSSFYWLHGQPVRAPDAPKFGMVRVQDHEGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatacgccgcaacgtcagcgggatcatcctgctcgacaagccg
ctgggttttacctccaacgcggccttgcagaaggttcgctggttgctcaatgccgagaag
gctggccataccggcagcctcgatccgctggcaacgggtgtattgcccttgtgcttcggt
gaagccaccaagttttcgcaatacctgctcgattcggacaagtcctacgaaaccatgatg
caactcggcaagaccacgaccacgggcgactccgaaggcgatgttctgctgacgcgtccc
gtgaccgttggtcgtgacgatatcgacgccgcattgcccgcttttcgtgggcaaatcagc
cagataccgccgatgtactccgccctcaagcgggacggacagcctctttacaagctggca
cgtgcaggggaagtagtggagcgcgagccccgttctgttactattgcgcgcttggaattg
cttgcctgcgaaggcgacacggcacgtctgtcggtcgattgcagcaaaggcacctatatc
cggaccctggtcgaggatatcggtgagcagctcggttgtggtgcctacgtcgcagaactg
cgtcgtacccaggccggaccgttcagtctggcccagacggtcacgctggaagagcttgag
caggtgcatgccgacggtggcaatgaagcggttgaccgctttctgatgccttcggacagt
ggcctgctggactggccgctgctgaagttttcggagcacagttcgttctactggttgcat
ggtcagccagtgagagcaccggacgcgccaaagttcggcatggtgcgggtgcaggatcat
gaaggtcgcttcatcggtatcggtgaagtcagtgaagacgggcgtattgcgccgcgtcga
ttgattcggtcagagtga
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