KEGG   Pseudomonas viridiflava: CFBP1590__4600
Entry
CFBP1590__4600    CDS       T06554                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pvd  Pseudomonas viridiflava
Pathway
pvd03030  DNA replication
pvd03430  Mismatch repair
pvd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pvd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CFBP1590__4600
   03430 Mismatch repair
    CFBP1590__4600
   03440 Homologous recombination
    CFBP1590__4600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvd03032]
    CFBP1590__4600
   03400 DNA repair and recombination proteins [BR:pvd03400]
    CFBP1590__4600
Enzymes [BR:pvd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CFBP1590__4600
DNA replication proteins [BR:pvd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CFBP1590__4600
DNA repair and recombination proteins [BR:pvd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CFBP1590__4600
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: SMS12186
UniProt: A0A1Y6JQG0
LinkDB
Position
I:5116378..5117103
AA seq 241 aa
MSRTVKPDQDVAPLNWPETFDRLTQTSRHPLLQNYYRSGVPGADEPLDEIPLLAMDLETT
GLNAESDNIVSIGIMPFTLKRIQCGRSLYWVIKPPTELSSASVVFHHITHADIHSAPQLS
DVMEQLLTAMAGKVMVVHYRAIERNFLDQALRRQIGEGLQFPVIDTMQLEARLYRKKRGW
IDRLLRRQPVSIRLADSRSRYHLPQYLAHHALTDALATAELLQAQIATHYAPSTTVGEVW
S
NT seq 726 nt   +upstreamnt  +downstreamnt
atgagccggaccgtgaagccagaccaagacgttgcgcccctgaattggccagagacgttt
gaccgactgacgcaaacgtcccgccatccgctcctgcaaaactattaccgctccggcgtt
ccgggagcagatgagcctctggacgagatcccgttgctcgccatggacctggagaccact
gggctgaatgccgagtccgacaacatcgtcagcattggcatcatgcccttcaccctcaag
cgcatacagtgcggccggtcactctactgggtgataaaacctcccaccgagctgagcagt
gcttcagtggtgtttcaccacatcacccacgcagacatccacagtgcgccgcagctgtcc
gacgtgatggagcagttgctgaccgcgatggcaggcaaggtcatggtggtgcactacaga
gccatcgagcgcaattttctcgatcaggcattacgcagacagattggtgaagggcttcag
tttccggtcatcgacaccatgcaactggaggcgcgcctgtaccgaaaaaaacgtggctgg
attgaccgcttgctgaggcgtcagccggtgtcgatccggctggccgacagccgcagtcgc
taccatcttccgcagtaccttgcgcaccatgccttgaccgacgcactggcaacggcggag
ctgctgcaagcgcagatagccacgcactatgcgccatcgacgaccgtgggtgaggtatgg
agttga

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