Pseudomonas viridiflava: CFBP1590__4603
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Entry
CFBP1590__4603 CDS
T06554
Name
(GenBank) extracellular solute-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFBP1590__4603
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvd02000
]
CFBP1590__4603
Transporters [BR:
pvd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CFBP1590__4603
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
SMS12189
UniProt:
A0A1Y6JQY2
LinkDB
All DBs
Position
I:complement(5120354..5121868)
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AA seq
504 aa
AA seq
DB search
MKARPVKLLTVAMLAACSLAAGVAEAAGVLTIGRREDGTTFDPIKSAQNIDNWVFSNVYD
VLIRVDNKGTKLVPGLAESWSISPDGLTYTLKMRPSKFSDGSELTASDAVFSLLRIRDDK
GSLWSDSYKIIDTAVASDPHTLVITLKHPSASFLSQLALPNVSILSEKAMKSLGEEAYAE
KPVGSGAFTVKEWRRGDRVILEKNPNFWEASTVSLDGVEWISVPDDNTRMLKVQAGELDA
AIYVPFSRVETLKKDAGLVVHEDPSTREDHLLINHEHGALAKVEVRQALDMAIDKKSLVE
AATFGLGTVANSYIPKGALYHYADNLQRPYDPVKAKKMLADAGASDLKLNYIVNAGNEVD
EQIAVMLQQQLAKVGVTTTLQKVDPSQSWDMLIAGDYDISVMYWTNDILDPDQKTTFVLG
HDTNMNYMTRYKNDKVKELVAAARVEMDPKKREQMYIDLQKMAKADVNWIDLYYSPYISV
SRKNIEHFGQNPLGRFTLEETVKR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacgacctgtgaagttgctgaccgtcgccatgctggcggcctgttctctggct
gccggggtggcggaagccgctggcgtgctgaccatcggccgtcgcgaagacggcaccacg
ttcgacccgatcaagagcgcgcagaacatcgataactgggtgttttccaacgtctacgac
gtgctgatccgcgttgataacaagggcacgaaactggtgccggggctggcagaaagctgg
agcatttcaccggacggactcacctacaccttgaagatgcgcccgtcgaagttttccgac
ggctccgagctgactgccagcgatgcggtgttcagcctgctgcgcattcgtgatgacaaa
ggctcgctgtggagcgactcgtacaaaatcatcgacaccgctgtggcaagcgacccgcac
acgctggtgatcaccctgaaacatccgtcggcttcgttcctctcgcaactggcgctgccc
aacgtctcgattctttccgagaaagccatgaaaagtctgggcgaagaagcctacgcggaa
aaaccggtggggtcgggtgcgtttaccgtcaaggagtggcgacgtggcgaccgggtgatt
ctggaaaagaaccccaacttctgggaagcctcgaccgtcagccttgacggtgttgagtgg
atctcggtaccggacgacaacactcgcatgctcaaggtccaggccggcgagctggatgcc
gcgatctacgtgccgttttcccgcgtggagactctgaagaaagacgccggtctggtcgta
catgaagacccgtccacccgcgaagatcacctgctgatcaaccatgagcatggcgcactg
gcgaaagtggaagtgcgtcaggcgctggacatggccatcgacaagaaatccctcgtagaa
gccgccaccttcggactgggtactgttgccaattcctacatccccaaaggcgcgctgtat
cactatgctgacaacctgcaacgcccttacgacccggtgaaagcgaagaaaatgctggcc
gacgcgggcgcttcagacctgaaactcaattacatcgtcaacgcaggcaacgaagtcgac
gagcagatcgccgtcatgctgcaacagcaactggccaaggttggcgtgaccaccacgctg
cagaaagtcgacccgagccagagctgggacatgctgatcgccggtgactacgacatctcc
gtgatgtactggaccaacgacatcctcgacccggaccagaagaccacgttcgtgctcggg
catgacaccaacatgaactacatgacccgctacaagaacgacaaggtcaaggagctggtt
gccgccgcccgcgtggaaatggacccgaaaaaacgtgagcagatgtacatcgacctgcag
aaaatggccaaggccgacgtgaactggatcgacctctactacagcccgtacatcagcgtg
tcgcgcaagaacatcgaacacttcggccagaacccgctgggtcgcttcacgctggaggag
acggtcaagcgttga
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