Pseudomonas viridiflava: CFBP1590__4892
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Entry
CFBP1590__4892 CDS
T06554
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pvd
Pseudomonas viridiflava
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvd03021
]
CFBP1590__4892 (rpoH)
Transcription machinery [BR:
pvd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CFBP1590__4892 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
IF2_N
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
SMS12478
UniProt:
A0A0D0KZA2
LinkDB
All DBs
Position
I:complement(5464708..5465562)
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AA seq
284 aa
AA seq
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MTNSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLGAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDSDWTDNSTANLHQALDVLDERSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKTSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattctttgcaacctgcttatgccttagtcccgggtgcgaaccttgaggcctac
gtgcatacggtcaacagcattccgctgctgacgcccgagcaggagcgtgaactggctgag
agtctctactatgagcaggatctgggggcggctcggcagatggttctcgcccacctgcgt
tttgtcgtgcacatcgcacgcagttattccggttacggtctggctcaggctgacctgatc
caggaaggtaacgtcggtctgatgaaggccgtgaagcgtttcaaccctgaaatgggtgtg
cgtctggtgtcgttcgccgtgcactggatcaaggcggaaatccacgagttcatcttgcgc
aactggcgcatcgtgaaagtcgccacgaccaaggcgcagcgcaagctgttcttcaacctg
cgcagccagaagaagcgtctggcttggctgaacaacgacgaagtgcatcgcgtcgctgaa
agcctgggtgtcgagccacgtgaagtgcgcgagatggaaagccgcctgaccggccacgac
atggccttcgacccggcagccgaagctgacgacgacagtgcattccagtcgccagccaac
tacctggaagaccatcgctacgacccggcgcgtcagttggaagattccgactggaccgac
aactccaccgccaatctgcatcaggcgctggacgtgctggacgaacgcagccgcgacatc
ctctaccagcgctggctggcagaagaaaaagccacgctgcacgacctggcgcagaagtac
aacgtctccgccgagcgtattcgtcagctcgagaagagtgcgatgaacaagctcaagacg
tcgatagcggcgtaa
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