Pseudomonas viridiflava: CFBP1590__5280 Help Entry CFBP1590__5280    CDS       T06554                                  Name (GenBank) type VI secretion protein IcmF   KO K11891   type VI secretion system protein ImpL Organism pvd  Pseudomonas viridiflava Pathway pvd02025   Biofilm formation - Pseudomonas aeruginosa pvd03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:pvd00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     CFBP1590__5280  09140 Cellular Processes   09145 Cellular community - prokaryotes    02025 Biofilm formation - Pseudomonas aeruginosa     CFBP1590__5280  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:pvd02044]     CFBP1590__5280 Secretion system [BR:pvd02044]  Type VI secretion system   Imp/Vas secretion system core components    CFBP1590__5280 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  IcmF-related_N IcmF-related IcmF_C IcmF_helical AAA_29 RsgA_GTPase Motif Other DBs NCBI-ProteinID:  SMS12866 UniProt:  A0A1Y6JSD9 LinkDB All DBs Position I:complement(5878534..5882064) Genome browser AA seq 1176 aa AA seqDB search MMKNFFKKVGAFLRKTWVWTLLLVLFVALLVWFVGPLLAVDDYKFWESSTSRLLTISVLF LIWGLTMVFVSWRAGVRKKALEESEDGQDRIRREEQIDEEQKELKTRFKDALKTLKTSSL YRGRSERWRSDLPWYLLIGPQGSGKTSLLDFSGLEFPINKIERKLTRDTLGTRHCDWYFA DHGVLIDTAGRYLTQPDAEVDGSAWSTLLDLLRKRRRNRPLNGVLVTIPVETLLNSSEQH LETLARQVRARLQDVHQKLHVDVPVYLVLSKADRLLGFDEFFDQLTREESDQVLGTSFRK EQKGTDVAVLRTEFEELLRRLNSQVIMRMHQERDTQRRGRILDFPHRLGQIGERLCLFVD LAFTGNRYQRVSQLRGFYLTSAPHLTEEMDATTAGIGANLGMSAGVLPTLRSGRSRFIHH LLSRVIFPEADLAGLDKRERSRIHWGQRALYVGALASLALFGVLWAGGFSANYSRLENLR NLAQNWTQQRSALTARDDSMAVLKTLDTSYAATQVFPEKGDVSYHERVGLYQGEEVNPVV RVAYERELHDQLLPRVANLLESQIRANTKDRDRLLNSLRAYLMLNMTDRRDAQWLKDWVA TEWSQRYTGNTAVQNGLNTHFDRLLKQPFSYPLNDPLVAQARQILRSESLATVVYRMLRE QARNLPEYTLSQHLGPQGALFVGTDYKIPGFYTQQGYQQYFSVQGTKLVTDILSDNWVLG EGTGLSTMDLRRLMVELEQLYFRDYANYWGEAVGQVQLPAINDFGEGAEQLAGLTSANSP IIQMLVEVRENTRFPVVADTADEAADAAGQLAENGGKLGKLAAAAAGKASDALAKNLPDT ARKSLQSRFEPLHRLLDDNNGPTADLTPALAALNELQLQMASLARSSSPDQAAFEMAKNR MGGQRDALSNLRTTSGRLPRPVGVWFNVLAEDTWRLVLGDAYQYLNQRYQSELYSFYGKA ISKRYPFDAHSASDVAISDFREFFKAQGIADRFFDSYMRPFVSGDPGNYRMRSVDGYTLP VSKVYLDQMASALVIRQSFFADNPAEPQVQFKLEPYTLDPAVSRSEFKFGDKTIEYRHGP IVPVSFKWPTDAEDGRTSLVLDRMAGRPLGLEKNTGPWSLFRLFDLMQTEYLKGRDVLVL KADVGGLRANYLLTSQRTPNPFDMGTLRSFRMPGQL NT seq 3531 nt NT seq  +upstreamnt  +downstreamnt atgatgaaaaactttttcaagaaagtcggcgcattcctgcgcaagacatgggtctggacg ctgctgctggtgctgttcgttgcgctgttggtgtggttcgtcgggccgctgctggcggtc gatgattacaagttctgggaaagctccacctcgcgcctgctgaccatcagcgtgctgttc ctgatctggggcctgacgatggtgttcgtcagctggcgcgcgggtgttcgcaagaaagcc ctcgaggaaagcgaagacggccaggatcgtatccgccgtgaagagcagatcgacgaagag cagaaagagctgaaaacgcgcttcaaggacgcgttgaaaaccctcaagacctcaagcctg tatcgcggtcgcagcgagcgctggcgcagtgatttgccgtggtacctgctgattggtccg cagggcagtggcaaaaccagtctgctggatttttcgggcctcgagtttccgatcaacaag atcgaacgcaagctgacccgcgacaccctcggcactcgccattgtgactggtacttcgcc gatcacggcgtgctcatcgacaccgctggccgctacctgacccagccggatgccgaagtc gatggcagtgcctggagcaccttgctggatctgctgcgcaaacgtcgtcgcaatcgtccg ctgaacggtgtgctggtgaccattccggtggaaaccctgctgaacagcagcgagcagcac ctggaaacactggctcgtcaggtgcgtgcgcgcctgcaggatgtgcatcagaaactgcac gtcgatgtgcctgtctatctggttctgagcaaagccgaccgtctgttgggcttcgacgaa ttcttcgatcaactgacgcgtgaagaaagcgatcaggtcctcggcaccagcttccgcaaa gagcagaagggcaccgatgtcgcggtgctgcgtaccgagttcgaggagttgctgcgtcgc ctgaacagtcaggtgatcatgcgcatgcaccaggagcgtgatacccaacgccgtggccgc attctcgacttcccgcatcgactggggcagatcggcgaacgcctgtgtctgtttgttgac ctcgcattcactggcaaccgctaccagcgtgtcagccagctgcgcggtttctacctgacc agcgcaccgcatctcacagaggaaatggacgccactacggccggtatcggtgccaatctg ggcatgagtgctggcgtgctgccaaccctgcgcagcggccggtcacggtttatccatcac ctgctcagccgtgtcatctttccagaggccgatcttgctggcctggacaagcgcgagcgc agccgtattcattggggccagcgtgccttgtacgtgggggcacttgcttctctggcgctg tttggcgtgctctgggcaggcgggttctctgcaaactattcacggctggagaatctgcgc aatctggcccagaactggacgcagcagcgttcggcgctgaccgcccgcgatgactccatg gcggtcctcaagacgctcgacaccagctatgcggccactcaggtgtttcccgaaaaaggc gatgtgagttaccacgagcgtgttggtctgtatcagggcgaagaggtcaacccggtggtc agggtagcttatgagcgcgagcttcatgatcagttgctgccccgcgtagcgaacctgctg gaaagccagatccgcgccaacaccaaggatcgcgaccgcctgctcaacagcctgcgtgca tacctgatgctgaacatgacggatcgccgcgacgcgcaatggctcaaggactgggtcgcc accgaatggtctcagcgctataccggcaatacagcggtacagaacggcttgaacacccat tttgatcgtttgctgaagcagccattcagctacccgctgaatgatccgcttgtggctcag gcgcgtcagattctgcgcagcgagtccttggcgactgtggtttaccgcatgctgcgcgag caggcccgtaatctgccggaatacaccttgagccagcaccttggtcctcagggcgcactg tttgtcggcaccgattacaaaatccccggcttctacacccaacagggctaccagcagtac ttctctgttcagggcacgaaactggtcaccgatatcctgagcgacaactgggttctgggt gagggcactggcctgagcaccatggacctgcgtcgtctgatggttgaactggagcagctg tacttccgtgactacgccaactattggggcgaagcggtaggccaggttcaactgcctgcg atcaatgacttcggcgaaggcgccgagcaactggcaggtctgacgtcggccaactcgccg atcatccagatgctggttgaagtgcgcgagaacacccgtttcccggtggtcgccgacacg gctgatgaggccgctgatgcagcaggccaactggcggagaatggcggcaagctcggtaag ctggcggccgctgcagcgggcaaggcatccgatgcgttggcaaaaaaccttccggatacc gccagaaagtctctgcaaagccgcttcgagccattgcatcgcttgctggatgacaacaat ggcccgactgccgacctgaccccggctctggccgcgctcaacgagctgcaactgcagatg gcaagtctggcccgttccagctcgccggatcaggctgctttcgaaatggccaaaaaccgc atgggcggtcagcgtgatgcgctaagcaacttgcgcacgacatccggtcgtctgccacgt ccggtgggtgtgtggttcaacgtgctggcagaagacacctggcgtctggtgttgggcgat gcctatcaatacctgaaccagcgctaccagagtgagctgtacagcttctacggcaaggcg atcagcaagcgttatccgttcgatgcccacagcgccagcgacgtcgcaatcagcgatttc cgtgagttcttcaaggctcagggtattgccgatcgcttcttcgacagctacatgcgtccg ttcgtcagtggcgatccgggcaactaccgcatgcgcagcgtcgatggttacaccttgccg gtttccaaggtctacctcgatcagatggcctcggcactggtgatccgtcagagcttcttt gccgacaaccctgccgaaccgcaagtgcagttcaagctggagccttacacccttgacccg gctgtcagccgctccgagttcaagtttggcgacaagaccattgaataccgtcacggtccg atcgtaccggtgtcgttcaaatggcctactgatgccgaagacggtcgcaccagtctggta ctcgacagaatggctggccgtccgctgggtctcgaaaagaacaccggcccatggtcgctg ttccgcctgttcgatctgatgcagaccgaatacctgaaggggcgtgacgtcctggtgctc aaggccgacgtgggtggtctgcgcgccaactacctgttgaccagccagcgcacgcctaac ccgttcgacatgggtacgctgcgcagcttccgtatgccggggcagctttga

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