Pseudomonas viridiflava: CFBP1590__5288
Help
Entry
CFBP1590__5288 CDS
T06554
Name
(GenBank) hypothetical protein
KO
K11895
type VI secretion system protein ImpH
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
CFBP1590__5288
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvd02044
]
CFBP1590__5288
Secretion system [BR:
pvd02044
]
Type VI secretion system
Imp/Vas secretion system core components
CFBP1590__5288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
HalOD2
Motif
Other DBs
NCBI-ProteinID:
SMS12874
UniProt:
A0A1Y6JSR8
LinkDB
All DBs
Position
I:complement(5890428..5891435)
Genome browser
AA seq
335 aa
AA seq
DB search
MDTTYGPPAPALSGLTLGIREYSLFQAVLLVVDRLRDAHPHLSEDDLYDQLEFQANPSLG
FPSSDVSRVEFFHEHGHLRARMQFNLIGLVGSGSPLPAFYGEQALGDSEDGNPTRNFLDL
FHHRLQRLMLPIWKKYRYRASFESGALDPFSAQLFALIGLGGEEIRRAQELNWKRLLPYL
GLLSLRAHSAALIEAVLRYYFKHAELTIEQCIERRVEILDEQRNRLGRANSMLGEDLVLG
DHVRDRSGKFRIHIRELDWQRFHEFLPIGFGYQPLCALVRFTLRDPLDYDIRLVLRQEEI
RELRIGEQNACRLGWTSWLGREKADGVVTLGSKIH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggacaccacgtatgggcctccagcccctgctttaagcgggctgaccctgggtatacgc
gagtactcgctgtttcaggccgtgctgctggttgtcgaccggctgcgcgatgcacacccg
cacctgagcgaagacgacctatacgaccagttggagtttcaggccaacccgagccttggc
ttcccgtcgagtgacgtcagtcgcgtggagtttttccacgagcacgggcatttgcgcgcg
cgtatgcagttcaacctgatcggtctggtcggttcgggttcgccactgccggcgttctac
ggtgagcaggcgctgggcgacagcgaagacggcaacccgacgcgtaacttcctcgacctg
ttccaccatcgcctgcaacggttgatgttgccgatctggaagaaatatcgctaccgcgcc
agttttgaaagcggcgcgctcgatccattttcggcacagctatttgccttgatcggcctg
ggcggcgaagaaatccggcgcgcccaggagttgaactggaaacgcctgttgccctatctg
ggcctgctcagcctgcgtgcgcactcggctgcgctgatcgaagcggtgctgcgttattac
ttcaagcacgccgaactgaccatcgagcaatgcatcgagcgccgggtggaaattctagac
gaacagcgcaaccgcctgggacgtgccaacagcatgctcggtgaggatctggtgctgggc
gatcacgtgcgcgaccgcagcggcaagtttcgcattcatatccgcgagctggactggcaa
cgctttcacgaattcctgccgatcggtttcggctatcaaccgctgtgcgcgctggtgcgg
ttcacgttgcgtgacccgctcgactacgacattcgactggttctgcgccaggaagaaatc
cgcgagttgcgtatcggtgaacagaacgcctgtcgcctgggatggaccagttggctcggc
cgcgagaaagcggacggcgtggtgaccctgggcagcaaaattcattaa
DBGET
integrated database retrieval system