Pseudomonas viridiflava: CFBP1590__5295
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Entry
CFBP1590__5295 CDS
T06554
Name
(GenBank) hypothetical protein
KO
K11900
type VI secretion system protein ImpC
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
CFBP1590__5295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvd02044
]
CFBP1590__5295
Secretion system [BR:
pvd02044
]
Type VI secretion system
Imp/Vas secretion system core components
CFBP1590__5295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
SMS12881
UniProt:
A0A0Q0DKU1
LinkDB
All DBs
Position
I:complement(5896823..5898301)
Genome browser
AA seq
492 aa
AA seq
DB search
MPSNSTAKQKNVETGEQSILDSIIAQTSLTRDDEAYDIAKRGVSAFIEELLKPQNGNEPV
KKAMVDRMIAEIDAKLSRQMDEILHHPDFQSLESSWRGLQLLVDRTNFRENIKIEILNVS
KDDLLEDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYFMSPSSPDVKLMQYVSS
VACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVGLTV
PRFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIG
PQSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFS
ASSVQKPKFFGNSAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLE
LELNKWIRQYVADQENPSAEVRGRRPLRAAQITVSDVEGEPGWYRVSLNVRPHFKYMGAD
FTLSLVGKLDKE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcaacagtacagcaaagcaaaaaaacgttgagacaggcgaacaaagcattctc
gacagcatcatcgcccagaccagcctgacgcgtgacgacgaagcctacgacatcgccaag
cgtggtgtatcggccttcatcgaagaattgctcaagccgcagaacggcaacgagccggtc
aagaaggcaatggtcgaccgcatgatcgccgagatcgatgccaagctcagccgtcagatg
gatgagatcctgcaccaccctgacttccagtctctggaatcgtcgtggcgtggtctgcaa
ctgctggtcgatcgcaccaacttccgtgaaaacatcaaaatcgaaatcctcaacgtctcc
aaggatgacttgctggaagacttcgaagattcgccggaagtgatgcagtcgggcctgtac
aagcacatctacaccgctgaatacggccagttcggtggtcagccggttggcgcgatcatc
gccaactacttcatgtccccaagctcgccggacgtgaaactgatgcagtacgtctccagc
gtagcctgcatgtctcacgcaccgttcattgctgctgccggcccgaaattcttcggcctg
gaaagcttcaccggcctgccggacctgaaagatctgaaagatcacttcgaaggcccgcag
ttcgccaaatggcagagcttccgccagtcggaagactcccgttacgtcggtctgaccgtt
ccgcgtttcctgctgcgcaacccgtacgatccggaagaaaacccggtcaaatcgttcgtg
tacaaggaaaccgttgccaacagccacgagcattatctgtggggtaacacggcttacgcg
ttcggcaccaagctgaccgacagcttcgccaagttccgctggtgcccgaacatcatcggc
ccgcagagcggtggtgcggttgaagacctgccgttgcaccatttcgaaagcatgggcgaa
atcgagaccaagatccctaccgaggttctggtcagcgaccgtcgtgaatacgaactggct
gaggaaggcttcatctccctgaccatgcgtaagggcagcgacaacgcggcgttcttctcc
gccagctccgtgcagaagccgaagttcttcggcaacagcgctgaaggcaaggctgcagag
ctgaactacaagctgggcacccagctgccgtacatgatgatcgtcaaccgcttggctcac
tacttgaaagtgctgcagcgcgagcaactcggttcgtggaaagagcgtaccgatctcgag
ctggaactgaacaagtggatccgtcagtacgtcgccgaccaggaaaacccgagcgccgaa
gtgcgtggtcgtcgcccgttgcgcgccgcccagatcaccgtcagcgacgtcgaaggcgag
cctggctggtaccgcgtcagcctgaacgtgcgtccgcacttcaagtacatgggtgctgat
ttcaccctgtcgctggttggcaagctggacaaagagtaa
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