Pseudomonas viridiflava: CFBP1590__5384
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Entry
CFBP1590__5384 CDS
T06554
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd03420
Nucleotide excision repair
pvd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFBP1590__5384 (uvrD)
03430 Mismatch repair
CFBP1590__5384 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvd03400
]
CFBP1590__5384 (uvrD)
Enzymes [BR:
pvd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFBP1590__5384 (uvrD)
DNA repair and recombination proteins [BR:
pvd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFBP1590__5384 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CFBP1590__5384 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
SMS12970
UniProt:
A0A0D0MPK5
LinkDB
All DBs
Position
I:6007586..6009769
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLMQVEQASPHSVL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLVQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLTTMRSIYEAYE
AACQRAGVIDFSELLLRALDLWRDNPGLLAHYQRRFRHVLVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDTEVIRLEQNYRSTASILKAANGLIV
NNSGRLGKELWTDVGDGELISLYAAFNEHDEARYVVETIESVLKTGISRNDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHADVSMWEAMRLLVANKGLTGRAATALGGFIELIENLSAKVMDMPLH
LMTQTVIEQSGLITYHEQEKGEKGQARVENLEELVSAARAFENTESEEDLTPLAAFLGHA
SLEAGDTQAQEHEESIQLMTLHSAKGLEFPHVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQQLVMTYAETRRLYGSETYNKVSRFVREIPPALIQEVRLSNSVSRPFGGTQ
KVNNSSLFTGTGIPETEFTLGQRVQHAVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLVAL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctcttcttcttaattccctcaacgatgcccagcgtcaggccgta
gccgcctccctgggtcgtcagttggtcctggccggtgctggctccggcaaaacccgtgtg
ctggtgcatcgcatcgcctggctgatgcaggtcgagcaagcctccccgcactcggtcctg
tcggtgacgttcaccaacaaggccgccgccgagatgcgccatcgcatcgagcaactgatg
ggcatcagcccggcaggcatgtgggtcggaacgttccacggcctggcgcaccgcctgctg
cgggcgcactggcaggaagccgggctggtgcagacctttcagattctggacagcgacgac
cagcaacgtctggtcaaacgcgtgatccgcgagctgggtctggacgagcaacgctggcct
gcccgtcaggcgcagtggttcatcaatggccagaaagacgaagggctgcgtccgcagcac
attcaggccagcggcgacctgttcctgaccaccatgcgcagcatctatgaagcctatgag
gcggcctgccaacgtgccggcgtgatcgacttctccgaactgctgctgcgcgcgctcgac
ctgtggcgcgacaaccccggtctgctggcgcactatcagcgccgcttccgccacgtgctg
gtggacgaattccaggacaccaacgccgtgcagtacgcctggttgcgtctgttggctcag
ggtggcgacagcctgatggtggtcggcgacgacgatcagtccatctacggctggcgcggc
gcgaagatcgagaacattcaccagtattcgtccgacttcccggataccgaagtcatccgt
ctggagcagaactaccgctccacggcgagcatcctcaaagcggccaacggcttgatcgtc
aacaacagcggccgcctgggtaaagagctgtggaccgatgtcggcgacggcgagctgatc
agcctgtatgccgccttcaacgaacacgatgaagcgcgttatgtggtcgagaccatcgag
agcgtgctcaagaccggtatctcgcgtaacgacatcgccattctctaccgctccaacgcc
cagtcgcgggtgctggaagaagccctgctgcgcgaacgcattccataccgcatctacggc
ggccagcgattcttcgaacgcgccgagatcaagaacgccatggcgtatctgcgcttgctg
gaaggtcgcggcaacgacgcggcgcttgagcgggtcatcaacgttccggcgcgcggcatc
ggtgaaaagaccgttgaagcgattcgtgaacatgcccgtcatgccgacgtgtcgatgtgg
gaagcgatgcgcctgctggtcgccaataaaggcctgaccggccgtgcggcgactgcgctg
ggcgggttcatcgagctgatcgagaacctgtcggccaaggtcatggacatgccgctgcac
ctgatgacccagaccgtcatcgagcagtccgggctgatcacctatcacgagcaggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcgcgcgct
ttcgagaacaccgaaagtgaagaagacctgaccccgctggcggccttcctcgggcatgcg
tcgctggaagccggtgacactcaggcccaggagcacgaagaaagcatccagctgatgacg
ctgcacagcgccaagggtctggagtttccgcacgtgttcctggtgggcatggaagaggga
ttgttcccgcacaagatgagcctggaagagcccggccgtcttgaagaggagcgccgtctg
gcttacgtcggcattacccgcgccatgcagcaactggtcatgacctacgccgagacgcgt
cgcctgtacggcagcgagacctacaacaaggtctcgcgtttcgtacgcgaaatcccgccc
gcgctgattcaggaagtgcgcttgtccaacagcgtcagccgaccattcggcggcacgcag
aaggtcaacaacagcagcctgttcaccggtaccggcatcccggaaaccgagttcaccctg
ggccagcgcgtgcagcatgccgtattcggcgaaggcgtgatcctcaacttcgaaggcgct
ggcgctcaggcacgcgttcaggtcaacttcgccgaaggcagcaagtggctgatgatgggc
tacgcgaagctggtggcgttgtaa
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