Pandoraea vervacti: UC34_00680
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Entry
UC34_00680 CDS
T03688
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pve
Pandoraea vervacti
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pve03000
]
UC34_00680
Transcription factors [BR:
pve03000
]
Prokaryotic type
Helix-turn-helix
LysR family
UC34_00680
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AJP59285
LinkDB
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Position
complement(146079..146999)
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AA seq
306 aa
AA seq
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MTSDAWMDDIGERPLRYLAEIAAMGGVRMAAESLGVNPSVVSRQVAALERRLRFPLIERR
GRNVIVTEIGQVLIDYYRDGQRRQRDLSARLEEYRHLKRGRVAIGVGEGFIGRLIAQALQ
RFSMSYPDILVEIRSGPTPTVLSLVRDDVVDIGLCARSEDDPAMRIHPFAAKALCAVVAP
THRFAAMTSVPPSELVHERLIFMTEEHGVQHFVHSVLDTARLNVIPAYRVDLFNTAQTLA
AAGLGVAFMSAITARRGIELGELVAVPIDHPIAAGFSSQMMTRVGRRLSPAADHLWKQLA
QSLAKR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgatgcatggatggacgacatcggcgagcgtccgctcaggtacctcgccgaa
attgccgcaatgggcggtgtgcgtatggcggcagaatcgctcggggtgaatccttccgtg
gtcagccgacaggtcgccgcactggagcggcggctgcgctttccccttatcgagcgacgt
gggcgcaacgtgatcgtcaccgaaatcggtcaggtgctcatcgactattaccgtgacggt
cagcgccgccagcgagacctgtcggcgcggctggaggaataccggcatctcaagcgcgga
cgcgtggccatcggtgtcggcgaagggttcatcgggcggttgatcgcccaggcgttgcag
cgcttctcgatgagctatcccgacatcctcgtcgagatccggtccggcccgacgcccacg
gtgctctcgctcgtgcgcgacgacgtggtcgacatcggcctgtgcgcccgctccgaggac
gatcccgccatgcgcattcatccgtttgcggccaaggcgctgtgcgccgtggtggcgccc
acacaccggttcgcggcgatgacgagcgtgccgccctcggaactggtgcacgagcggctc
atcttcatgaccgaggaacacggcgtacagcacttcgtgcactcggtgctcgacacggcg
cgtctgaacgtgattcccgcctatcgggtcgatctgttcaacaccgcgcagacgctcgcc
gcggccgggctcggcgtggcgttcatgtcggcgattaccgcgcggcgcggcattgaactc
ggtgaactggtggccgtgccgatcgatcatccgatcgccgccgggttctccagccagatg
atgacgcgcgtgggacgccgcctctcgcccgccgcagaccacctgtggaagcaactcgcg
caaagtctggcgaaacgctga
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