Pandoraea vervacti: UC34_01380
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Entry
UC34_01380 CDS
T03688
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
pve
Pandoraea vervacti
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pve03000
]
UC34_01380
Transcription factors [BR:
pve03000
]
Prokaryotic type
Helix-turn-helix
LysR family
UC34_01380
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_28
HTH_AsnC-type
HTH_Tnp_ISL3
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AJP56009
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Position
306070..307410
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AA seq
446 aa
AA seq
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MAIDTAVSLTNAPAAPRLACHERGTWSRAPQSNDATLLVRKLRGLRAMVAVLECDSVARA
ARMLHLSQSAVARSISDIEAELGFPLFHRSARGLIPNAAGQRLGVRATRALAELANGYRE
AFAATASQADGGARAASRFAAVVAPQQLTSFIAVAELGSGPLAASRLQCSQPTIQRNLDQ
LEDLIGIKLFRRTPRGTRLTDEALALLGPVKRALAELAIAEDELAPFGGRQQGTVIVAAL
PLSSGFLLPKAIDSLLHKSPYLTVTVVDGTYEALVRQLRQADVDMIVGALRANDVPPDIR
QEALFEDHLSVVARSDHPCLTSGRVPTLTELAGYGWVSPLPCTPARGVFERVFHAEGLAL
PQTQVHASSSPVVRGLLSSSDRLALLSPVQITSELRTGELAVVPVTLQHARRSIGVATRR
DGLLSPAAEQLLDELRALAPTMQHPT
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgacactgccgtcagtctcaccaacgcgccggcggcgccccggctcgcgtgc
cacgagcgcggcacgtggagccgcgcgccgcaaagcaacgacgccacgctgctggtgcgc
aagctgcgcggccttcgcgcgatggtggcggtactcgaatgcgactcggtggcgcgcgcg
gcgcgcatgctccatctgtcgcagtcggccgttgcacggtcgatctcggatatcgaagcc
gaactgggttttccgctattccatcgcagcgcgcgcgggctgatcccgaatgctgccgga
cagcgcctcggcgtgcgcgccacgcgggcgctcgcggaattggcgaacggttatcgcgaa
gcgttcgcggcgacggcctcgcaggccgacggcggcgcgcgcgccgcgagccggttcgcg
gccgtggtcgcgccgcagcaactcaccagtttcattgccgtggcggaactgggcagcgga
ccgctcgccgcgagccgtcttcagtgttcgcagccaacgattcagcgcaatctcgatcag
ctcgaagacctcatcggcatcaagctgttccggcgcacgccgcgcggcacacgtctgacc
gacgaggcgctggcgctgctggggcccgtcaagcgcgcactggccgaactggcgattgcc
gaagacgaactcgccccgttcggcggccgtcagcaaggtacggtcatcgtcgctgcgctg
ccgctctcgagcggtttcctgttgcccaaggccatcgacagcctgctgcacaagtcgccg
tatctcaccgtgaccgtggtcgacggcacgtatgaagcgctcgtgcggcagttgcgtcag
gcggacgtcgacatgatcgtcggcgcgctgcgggcgaacgacgtgccgccggacattcgg
caggaggcgcttttcgaggaccacctgtcggtcgtcgcgcgctcggatcatccgtgcctg
acatcgggcagggtgccgacactcaccgagcttgccggttacggctgggtgagtccgttg
ccctgcacgccggcgcgcggcgtattcgagcgcgtgtttcatgccgaagggctggcgctg
ccgcagacgcaggtgcacgcgagcagctcacccgtggtgcggggattgttgtcgtcgagc
gaccgcctcgcgctgctctcgccggtgcagatcacgtccgagctgcgcacgggggagctg
gccgtcgtgccggtgacgctgcaacatgcgcgccgctcgattggtgtggcgacgcgccgc
gacggtttgctctcgcccgccgccgagcaattgctcgacgaattgcgcgcgcttgcgccg
acgatgcagcatccgacataa
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