KEGG   Pandoraea vervacti: UC34_02525
Entry
UC34_02525        CDS       T03688                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pve  Pandoraea vervacti
Pathway
pve02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pve00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    UC34_02525
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pve02022]
    UC34_02525
Two-component system [BR:pve02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   UC34_02525
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_16 AAA_2 AAA HTH_50 HTH_30 HTH_Tnp_ISL3 AAA_7 C4bp_oligo TIP49 FleQ
Other DBs
NCBI-ProteinID: AJP59345
LinkDB
Position
549003..550352
AA seq 449 aa
MYKNLQILFVEDDELVRRATLQSLQLAGLDAFGLASAEAARERITPDFAGIVVSDIRLIG
MSGLELLAHLRQHAPEVPVILVTGHGDISMAVQAIRDGAYDFIEKPFAPDRLIESVKRAL
ETRKLMLENQALRRELAEQGGRASRIIGRSPSMETLRTLIANVAMTDAPVLINGDTGTGK
ELVARSLHELSRRRDAPFVALNCGALPEAIFESEMFGHEVGAFTGAAKRRIGKLEHASGG
TLFLDEIESMPAALQVKLLRVLQDGVLERLGSNQSIRVDCRVVAAAKGDMEALVREGTFR
RDLYYRLNVVTLALPPLRERREDILPLFEHFMLDAAVRYGRPAPVVSDRMRQELLQSDWP
GNVRELRNAADRLVLGVASAPEGDSLAPLPLKEQVERFERAVLQEALEHSKGNVAATAEA
LHVPKATLYEKLKRYGLHTRGHGDGSDGR
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgtacaagaacctccagatcctatttgtcgaagacgacgaactcgtgcggcgtgccacg
ctgcaaagcctgcaactcgccgggctggacgccttcgggctggcctcggccgaggctgcg
cgtgagcgcatcacaccggacttcgccggcattgtcgtgtcggacatccggttaatcggc
atgagcgggctcgaattgctcgcgcatttgcgtcagcatgcgccggaagtgccggtgatt
ctcgtcaccggtcatggcgatatctccatggccgtgcaggccattcgcgacggcgcttac
gatttcatcgagaagcccttcgcgccggatcgcctgatcgagtcggtcaagcgcgccctc
gaaacccgcaagctcatgctggaaaaccaggcgctgcggcgcgaactggcggagcagggc
gggcgcgcctcgcgcatcatcggacgcagcccctcgatggagacgctgcgcacgctgatc
gccaacgtggccatgacggatgccccggtgctcatcaacggcgacaccggcacgggcaag
gaattggtcgcgcgaagcctgcacgagttgtcgcgtcggcgcgatgcgccgttcgtcgcc
ctgaattgcggggcattgcccgaggcgattttcgagagcgaaatgttcggccacgaggtc
ggcgcgttcaccggtgcggcgaagcgtcggatcggcaagctggagcatgcgtcgggtggc
acgttatttctcgacgagatcgagagcatgcccgcggcgttgcaggtcaagctgctgcgg
gtgttgcaggacggtgtgctggagcgcctcggttcgaaccagtcgatccgcgtggattgc
cgtgtggtggcggcagccaagggcgacatggaagcgctggtgcgcgaggggactttccgt
cgcgacctgtattaccggctcaatgtggtcacactggcgttgccgccgttgcgcgagcgt
cgcgaagatatcctgccgctgttcgagcacttcatgctcgacgctgcggtgcgctacgga
cgcccggcgccggtggtctcggaccggatgcgtcaggagctgttgcagtcggactggccg
ggaaacgtgcgcgaactacgcaacgcggcggaccggctggtgctgggcgtggcgagcgcg
cccgagggggattcgcttgcgccattgcccctcaaggagcaggtcgagcgcttcgagcgt
gccgtgctgcaagaagcgctggaacatagcaagggcaacgtggcggcgacggccgaagcg
ctccatgtgccgaaggccacgctatatgaaaagctcaagcgctatggcctgcatacgcgc
gggcatggcgacggcagcgatggccgctga

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