Pandoraea vervacti: UC34_03415
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Entry
UC34_03415 CDS
T03688
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pve
Pandoraea vervacti
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
UC34_03415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pve03400
]
UC34_03415
DNA repair and recombination proteins [BR:
pve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
UC34_03415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
NMD3_OB
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AJP56305
LinkDB
All DBs
Position
complement(737179..738147)
Genome browser
AA seq
322 aa
AA seq
DB search
MARAIWKGAISFGLVNVPVTLFPASTTHKLDLDWLDKRTMSPVGYKRVNKENGKEVPRDQ
IVHGYEYEKGNYVVLSDDEIRAANPAATQTVDILAFVDASDVSFMYLDTPYYLVPERGGA
KAYALLHAALIRAGKLGIARVVMHTRAHLAVLAPAGDALVLDTLRWQDEMRDPAEVGLTK
EKLGKLAAPGDRELDMAIRLIDEMSGPWRPGDYHDTFQDDLKALIDRKIASGQTREVAQI
EASAPKLSGGNVTDLMALLKQSLGTKGKRESAAVDAEDVEEKPAKKTGKKTTARKTATRK
TAVRKTTASKAASKRTKSAKSK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgcgatatggaagggtgcgatcagcttcgggctggtcaacgtcccggtcacg
ctgtttcctgcgtcgacaacgcacaaactcgatctcgactggctcgacaagcgaacgatg
tcgccggtcgggtacaagcgcgtcaacaaggaaaatggcaaggaagtccctcgcgaccag
atcgtgcatgggtacgaatacgaaaagggcaactatgtcgtattgagcgacgacgagatt
cgcgcggcgaatcctgccgcgacgcaaaccgtcgacattctcgcgttcgtcgacgcgtcg
gacgtatcgttcatgtatctggatacgccgtattacctcgttcccgagcgtggcggcgcg
aaggcctacgcgctgctgcatgcggcgctcatccgcgcgggaaagctcggcattgcacgc
gtggtcatgcacacgcgcgcgcatcttgccgtgctcgcaccggcaggcgatgcactcgtg
ctcgacacgctgcggtggcaggacgagatgcgcgacccggccgaagtcggcctcacgaag
gaaaagctgggaaaactcgccgcccccggcgatcgcgaactggacatggcgatacggctg
atcgacgaaatgtccgggccgtggcgccccggcgattatcacgacacgttccaggacgac
ctcaaagcgctcatcgatcgcaagatcgcctcgggtcaaacgcgcgaagtcgcgcaaatc
gaggccagtgcgcccaagctctccgggggtaacgtcaccgacctgatggcattgctcaag
caaagcctggggacgaagggcaagcgcgagagcgccgccgtcgacgctgaagacgtcgag
gagaagccggcgaagaagaccggaaaaaagacgacagcgcggaagacggcaaccaggaag
acagcagtccggaagacgacagcgagcaaagccgcgtccaaacgcaccaaatccgcgaaa
tccaagtga
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