Pandoraea vervacti: UC34_05340
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Entry
UC34_05340 CDS
T03688
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pve
Pandoraea vervacti
Pathway
pve02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UC34_05340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pve02000
]
UC34_05340
Transporters [BR:
pve02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
UC34_05340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
OpuAC
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
AJP56576
UniProt:
A0A0C5JXX9
LinkDB
All DBs
Position
1167852..1169354
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AA seq
500 aa
AA seq
DB search
MRNVLLDLVLAAALTTGAASAMAQSTLRIGLQEDIGSLDPARSSQVVDRMVLRSLCSSLV
DIDTDLKFVPMLATAWNVSSDNKTWTFRLRKGVKFHDDEPFNAAAVKANLDRARSMPASN
RKSELSSIDHVDVVDDATVNIVLKTPDSALLATLSDRAGMMLAPKSLKDDAAVQSHPVCS
GPYKFVQRVQNDRVVLEKFPGFWDADKFAIQKVIYLPIPDTTVRLANVRSGSLDMLERLS
PSDVKSVKRDANLTFISMDGLGYYGLTFNVAANANKALRDKRVRQAFDLSIDRDAINQVI
GGGIFTPANQALPRSGQYYDASIKTTKRDVAKAKALLKSAGFEKVDVTLSFGNSTVSNQM
AQMLQAMLAESGITLKLRPMDYAAALDAAHRGDFDVLYNGWSGRVDPDGNLHQFVSCKGN
LNYGQYCNAEVDKLLGEARVKSTVAERKPLYDAANKILAEDDPILYLYVQPWPYVLSKKV
QGFVAYPDGLIRLRGVSLKG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacgttctgctcgatcttgttttggcggcggctctgacgaccggggcagcctcg
gccatggcgcaatcgacgctgcgcatcggcctgcaggaagacatcggttcgctcgatccc
gcgcgcagctcccaggtggtcgaccgcatggtgctgcgctcgctgtgcagctcgctcgtc
gatatcgacaccgacctgaagttcgtgccgatgctcgccaccgcctggaacgtgagttcg
gataacaagacctggacgttccgccttcgcaagggcgtgaagttccacgacgacgaaccc
ttcaacgccgcagccgtgaaagccaacctcgatcgcgcacgcagcatgccggcgagcaac
cgcaagagcgaattgtcgtcgatcgatcacgtggatgtcgtggacgacgcgaccgtcaac
atcgtactcaagacgccggactcggcgctgctcgccacgctgtccgatcgcgcgggcatg
atgctcgcgccgaagtcgctcaaggacgacgccgccgtgcaatcgcatccggtttgctcg
gggccgtacaagttcgtgcagcgtgtgcagaacgatcgcgtggtgctcgaaaaattcccg
ggcttctgggacgccgacaagttcgcgatccagaaggtcatctatctgccgattccggat
acgacggtgcgcctcgccaacgtgcgctcgggctcgctcgacatgcttgaacgcctgtcc
ccgtccgacgtgaagtcggtcaagcgcgacgcgaatctcacgttcatctcgatggacggg
ctgggctactacggactgacgttcaacgtggccgccaatgcgaacaaggcgctgcgagac
aagcgggtgcggcaggcgttcgatctgtcgatcgatcgcgacgccatcaatcaggtgatc
ggcggcggcattttcaccccggcgaatcaggcgttgccgcgctcggggcagtattacgac
gcgtcgatcaagacgacgaagcgcgacgtggccaaggcgaaagcgctgctcaagtcggcc
ggtttcgagaaggtcgacgtcacgctgagcttcggcaacagcaccgtctccaaccagatg
gcgcagatgctgcaggccatgctcgccgagtcgggcattacgctcaagctgcgtccgatg
gactacgcggcggcgctcgacgcggcgcatcgcggcgacttcgatgtgctctataacggc
tggtcgggacgcgtggatccggacggcaacctgcaccagttcgtctcgtgcaagggcaat
ctgaactacggccagtattgcaatgcggaagtcgacaagctgctgggcgaggcccgtgtg
aagtcgacggtcgccgagcgcaagccgctgtatgacgccgcgaacaagatcctcgccgag
gacgatccgattctgtatctgtacgtgcagccctggccgtatgtgctctcgaagaaggtg
cagggcttcgtcgcctatccggacggcctcatccgcctgcgtggcgtgagcctcaagggc
taa
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