Pandoraea vervacti: UC34_06310
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Entry
UC34_06310 CDS
T03688
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pve
Pandoraea vervacti
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pve03032
]
UC34_06310
03400 DNA repair and recombination proteins [BR:
pve03400
]
UC34_06310
Enzymes [BR:
pve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UC34_06310
DNA replication proteins [BR:
pve03032
]
Prokaryotic type
DNA Topoisomerases
UC34_06310
DNA repair and recombination proteins [BR:
pve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UC34_06310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AJP56703
LinkDB
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Position
1379619..1382240
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AA seq
873 aa
AA seq
DB search
MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRALFAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDASVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEVRMAKIGHELLADIDKETVDFGPNYDGSEKEPLILPARIPNLLLNGSSGIAVGMAT
NIPPHNLNEVVEGCLYVLKNPEATVDELIEIIPAPDFPTAGIIYGISGVREGYRTGRGRV
VMRAKTHFEDIDRGQRVAIIVDELPYQVNKRSLLERIAELVNEKRLEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKHTQLQDTFGMNMVALVDGQPKLLNLREMLVHFLAHRRE
VITRRTIYELRRARERGHVLEGLAVALANIDDFIAIIKAAPTPPLAKAALMEKSWDSSVV
REMLARAETETQGGLAAYRPEGLDLTVGVQADGLYRLSETQAQEILQMRLQRLTGLEQDK
IVSEYKEVMAQIADLLDILASPPRVTAIISEELTAVRAEFGDARRSTIEHNATELDTEDL
ITPQDMVVTLSHSGYIKSMPLSEYRAQKRGGRGKQAAATKDDDWIDTLFIANTHDTILCF
SNRGRVYWIKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPVKEYTEDRFVFMATSLG
TVKKTPLAAFSRPLKKGIIAVNLDDGDVLIGAAITDGAHDVMLFSDAGKAVRFDENDVRP
MGREARGVRGMQLEDGQTVIALLVAENEQQSVLTATLNGYGKRTSITEYTRHGRGTKGMI
AIQTSERNGRVVAATLVEPDDEIMLITTGGVLIRTRVSEIREMGRATQGVTLISLDEGTT
LSGLQRIVESDAEVADNGDAQGDDEAPEADVTE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggatcagttcgccaaagaaactctcccgatttcgctcgaagaagaaatgcggcggtcg
tacctcgattacgccatgagcgtgatcgtcggccgcgctttgccggatgtgcgcgatggc
ctgaagccagttcaccgccgcgcgttgttcgccatgcacgagctgaacaacgactggaac
cgtgcttacaagaagtcggcacgtatcgtcggtgacgtcatcggtaagtaccacccgcac
ggcgacgcttctgtatacgacaccatcgttcgcatggcgcagccgttctcgctgcggtac
atgctggtcgacggccagggtaacttcggttcggtcgatggcgacaacgctgcggccatg
cgatacaccgaagttcgtatggccaagatcggtcacgaactgctcgcggacatcgacaag
gaaaccgtcgacttcggtccgaactacgacggcagcgaaaaggaaccgctgattctgcca
gcgcgcatcccgaacctgctgctcaacggttcgtcggggattgcggtcggtatggcgacg
aacattccgccgcataacctcaacgaagtggtcgaagggtgcctgtatgtgctcaagaac
cccgaggcgaccgtcgacgaactgatcgagatcattccggcgccggacttcccgaccgcc
ggcatcatctacggcatctccggggtgcgcgaaggctatcgcaccggccgtggccgtgtg
gtgatgcgcgccaagacgcacttcgaggatatcgaccgcggccagcgcgtggcgatcatc
gtcgacgaattgccttatcaggttaacaagcgctcactgcttgaacgtatcgcagagctc
gtcaacgaaaagcgtctggaagggatttccgacattcgcgacgagtccgacaagagcggc
atgcgtgtcgtgatcgaactcaagcgcggcgaagtgcccgaggttgtcctgaacaatctc
tacaagcacacgcaactgcaagatacgtttggcatgaacatggttgcgctggtcgatggg
cagcccaagctgctgaacctgcgcgaaatgctggtgcacttcctggcgcatcgccgcgaa
gtgattactcgccgcacgatctatgaactgcgtcgcgcccgcgaacgtggtcacgtgctc
gaaggtctggcggtagcgctcgctaacatcgacgacttcatcgccatcatcaaggccgct
cctacgcccccgctcgcgaaggcggcgttgatggaaaagtcgtgggattcgtccgtcgtg
cgcgagatgctggcgcgcgccgagaccgagacgcaaggcggcctggcggcctaccgtccg
gaagggctcgacctcacggtcggcgtgcaggccgacggtctgtaccgcctgtccgagacg
caggctcaggaaatcctgcagatgcgtctgcagcgcctgaccggtctggagcaggacaag
atcgtctccgagtacaaggaagtgatggcccagattgccgacctgctcgacatcctggca
agcccgccgcgcgtgacggccatcatcagcgaagagttgacggccgtgcgcgccgagttc
ggcgacgcccgccgctcgaccatcgaacacaacgcgaccgaactcgataccgaagacctg
atcacgccgcaggacatggtcgtgacgttgtcgcactcggggtatatcaagtcgatgccg
ctctcggaataccgtgcgcagaagcgtggcggccggggcaagcaggctgcggcgacgaag
gacgacgactggatcgacacgctcttcatcgcgaatacgcatgacacgatcctgtgtttc
tcgaaccgcggacgtgtttattggatcaaggtctacgaagtgccgcagggttcgcggaac
tcgcgtggccgtccgatcgtcaatatgttcccgttgcaggaaggcgagaagatcaacgtc
gtgctcccggtcaaggagtacacggaagatcgattcgtgttcatggcaacgagcttgggc
acggtcaagaagacgccgctcgcggccttcagccgaccgctcaagaagggcatcatcgcc
gtgaatctcgatgacggcgacgtgctgatcggtgctgccattaccgacggtgcacacgac
gtcatgctgttctccgacgccggcaaggcggtgcgtttcgacgagaacgatgtgcgtccg
atgggtcgcgaggcgcggggcgttcgcggcatgcagctcgaagacggtcagacggtgatt
gcactgctggtggccgagaacgagcagcagtcggtgctcacggcgacgctgaacggctac
ggcaagcgcacgtcgatcacggaatatacccgccacggccgtggcactaagggtatgatt
gcgatccagacgagcgagcgcaacggccgtgtggtcgcggcaacgctggtcgagccggat
gacgagatcatgctgatcacgaccggcggggtgctgattcgtacgcgagtctccgagatc
cgcgaaatgggtcgcgccacgcagggggtgacgctgatcagcctggatgaaggcacgacg
ctctccggtctgcagcgcatcgttgagtccgacgcggaagtcgccgacaacggcgacgcg
cagggcgacgatgaagcgccggaagcggatgtcacggagtaa
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