Pandoraea vervacti: UC34_09420
Help
Entry
UC34_09420 CDS
T03688
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pve
Pandoraea vervacti
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pve03016
]
UC34_09420
Enzymes [BR:
pve01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
UC34_09420
Transfer RNA biogenesis [BR:
pve03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UC34_09420
Prokaryotic type
UC34_09420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
SUKH-3
Motif
Other DBs
NCBI-ProteinID:
AJP57170
LinkDB
All DBs
Position
2073124..2073924
Genome browser
AA seq
266 aa
AA seq
DB search
MRIALGIHYDGTAFSGWQSQPHGNTVQQALEAALREFGGVALPTTVAGRTDAGVHGIGQV
VHFDTDLDRAMFSWVRGVNAFLPKTVAVQWAQAMPDDFHARFAAFERTYFYVLYANPVRS
PLLHGRTGWLHTPLDLGAMRAASQVLVGEHDFSAFRSSECQAKTPVKHLYAIDIEQQGDF
FIFRFRASAFLHHMVRNIMGCLVSIGRGRQPASWMTHVLASGDRRQAAPTFMPDGLYLAR
VGYPQEFNVPEPNWAAWPFPMPWSSS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcgcactgggcatccactacgacggcacggcgttctccggctggcaatcgcag
ccgcatggcaacaccgtgcaacaggcgctcgaagccgcgctgcgcgaattcggcggcgtt
gcgttgccgaccacggtggcggggcgcaccgacgccggcgtgcacggcatcggccaggtc
gtgcatttcgacacggacctggaccgcgcgatgttctcctgggtgcgcggcgtgaatgcc
ttcctgcccaagacggttgcggtgcaatgggcgcaagcgatgccggacgactttcacgcc
cgcttcgcggcgttcgagcgcacgtatttctatgtgctttacgcgaatccggtgcgctcg
ccgctgctgcacggtcgcaccggctggctgcacacgccgctcgatctcggggcgatgcgt
gcggcgagtcaggtgctcgtcggggagcatgacttctcggcgttccggtcgtcggagtgt
caggcgaagacgcccgtcaagcacctctacgccatcgacatcgagcagcagggcgacttc
ttcatcttccgctttcgcgcgagcgccttcctgcatcatatggtgcgcaacatcatgggc
tgcctggtctcgatcggccgcgggcgccaaccggcgagctggatgacgcacgtgctcgcc
agcggcgaccgacgtcaggcggcgcccacgttcatgcccgacggcctctatctggcgcgc
gtggggtatcctcaggaattcaacgtgccggagcccaactgggccgcatggccgttcccg
atgccgtggtcaagctcatga
DBGET
integrated database retrieval system
