Pandoraea vervacti: UC34_09785
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Entry
UC34_09785 CDS
T03688
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pve
Pandoraea vervacti
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pve03021
]
UC34_09785
Transcription machinery [BR:
pve03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UC34_09785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_Crp_2
KORA
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AJP57213
UniProt:
A0A0C5JQ80
LinkDB
All DBs
Position
2153954..2155054
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AA seq
366 aa
AA seq
DB search
MLKRKRRTSQEEDLAAPEPDQDVDDRQSRQDEDVDDAFDEREAEEDDASSSDARDDAEEG
APSSGRKRKSADGDDFGTVLQAELTADTVQHYLNRISVKPLLTPAEELDYSTRAQAGEFA
ARQVMIERNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPGRGFRFSTYATWW
IRQSIERAIMNQARTVRLPVHVIRELNQVLRAKRHLEKSAAYIDGGEQRDAKIEDIADLT
GKTPEEITDILALNEHVASLDAPLEIDPGSSLLDLLSDDRSEAPEHEVQHRELEDLMRLW
LSRLSTKHRYVIERRFGLNRVEPATLEELADEMGLTRERVRQIQQEALVKLKRYFASNGV
RKDAVL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagagaaagcgtcgtacttcgcaagaggaagacctcgctgccccggagccagat
caggacgtagacgatcggcaatcccggcaggacgaggacgtggacgacgctttcgacgag
cgcgaggcggaggaggatgacgcgtcatcctccgatgcgagagacgacgccgaggagggg
gccccttcctccggccgcaagcgcaaatccgccgacggcgacgactttggcaccgttctt
caggccgaactcacggccgacactgtccagcattatctcaaccgcatcagcgtcaagccg
ctcctgacgccggcggaggaactcgactactccacgcgtgcgcaagccggcgagtttgcc
gcgcggcaggtcatgatcgagcgtaatctgcgcctggtcgtgagcatcgccaaggggtat
ctcaatcgcggcgtgccgttgctcgatctgatcgaggagggcaatctcggcttgatgcac
gccatcgagaagtttgacccgggacgcgggttccgcttctcgacctatgccacgtggtgg
attcgtcagagcatcgagcgcgccatcatgaatcaggcgcgcacggtgcgcctgcctgtg
catgtcattcgcgagctgaatcaggtgctgcgtgccaagcgtcacctggaaaagagcgcc
gcgtatatcgacggcggcgagcagcgcgacgcgaaaatcgaggatattgccgatctgaca
gggaagacgcccgaagagatcaccgacattcttgcgctcaacgagcacgtggcctcactc
gatgcgccactcgagatcgatccgggcagcagtttgctcgacctgctctccgacgaccgc
agcgaggcgccggagcacgaggtgcaacatcgggagttggaagatctgatgcggttgtgg
ctctcgcgcttgtccaccaaacatcgttacgtcatcgagcgccggttcggcctcaatcgc
gtggaacccgccacgctggaagaattggccgacgaaatggggctgacgcgcgagcgcgta
cgtcagatccagcaagaggcgctcgtcaaactcaaacgctatttcgcgtccaacggcgtg
cgcaaggacgccgtgctctga
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