Pandoraea vervacti: UC34_10405
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Entry
UC34_10405 CDS
T03688
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pve
Pandoraea vervacti
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pve03009
]
UC34_10405
Enzymes [BR:
pve01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
UC34_10405
Ribosome biogenesis [BR:
pve03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
UC34_10405
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AJP57309
UniProt:
A0ABN4FQ78
LinkDB
All DBs
Position
complement(2279888..2280607)
Genome browser
AA seq
239 aa
AA seq
DB search
MELERILQSQGFGSRKMCRKLVQSGAFAIDGVVHDNPRESLDPTGLQFTLDGELWDYREH
VYILLNKPEGFECSTSPTHHEGVHSLLPLPLAVRGVQPAGRLDQDTTGMLLLSDDGPFLH
AMMSPRRHVPKRYVATTKHPVTEEMLQALRDGVLLRDETETLAATDVMSPSSHEIALTIT
QGKYHQVKRMVAAAGNRVEGLVRIAIGGLPMGNLALGEWRYLSPDELLSLPYEVPQHTK
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atcgagctcgaacgtattctgcaatctcagggtttcggcagtcgcaagatgtgccgcaaa
ctcgttcaatccggcgctttcgccatcgatggcgttgtgcacgataaccctcgcgaatcg
ctggacccgacgggtctgcaattcacgctcgatggcgagctgtgggattaccgcgagcac
gtctacattctgctgaacaagcctgagggcttcgagtgctccacgagtccgacgcaccat
gaaggggtgcattcgttgctgcccctgccgctggcggttcgcggcgtgcagcccgccggt
cgtctcgatcaggacacaaccggcatgctgctgctctcggacgatggccccttccttcac
gcgatgatgtcgccccgccggcacgtccccaagcgatacgtcgccacaaccaaacatccg
gtgaccgaagagatgttgcaggcattgcgcgacggcgtattgctgcgcgatgagaccgaa
acgcttgctgcgacggacgtcatgagtccgtcgtctcacgaaatcgcgctaacgatcaca
caagggaaataccatcaggtcaagcgcatggtcgccgccgcaggcaaccgtgtcgaaggg
ctggtcagaatcgccattggtggcttgccgatggggaatctggcgcttggtgagtggcgt
tatctgtcgccggatgaactgctgtcactgccgtatgaagtgccgcaacacaccaagtga
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