Pandoraea vervacti: UC34_15405
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Entry
UC34_15405 CDS
T03688
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pve
Pandoraea vervacti
Pathway
pve03030
DNA replication
pve03430
Mismatch repair
pve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UC34_15405
03430 Mismatch repair
UC34_15405
03440 Homologous recombination
UC34_15405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pve03032
]
UC34_15405
03400 DNA repair and recombination proteins [BR:
pve03400
]
UC34_15405
Enzymes [BR:
pve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UC34_15405
DNA replication proteins [BR:
pve03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UC34_15405
DNA repair and recombination proteins [BR:
pve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UC34_15405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AJP57983
UniProt:
A0ABM5SZC7
LinkDB
All DBs
Position
3500911..3501525
Genome browser
AA seq
204 aa
AA seq
DB search
MQTVAILDFETTGLSPAQGDRATEIAVILWRDGQIVDRYQSLMNAGRRIPSDVAALTGIT
NDMIASAPPVAQVMREAAAFVGHCPVVAHNAGFDKRFWQAELAMLGARADHAFACTMLSA
RRLYPHAPNHRLSSLAQLLRLPQTGRAHRAMVDAEMTVHLWHRMHDDITRTYGLKRVDHA
LMSRVQATSKDKVPTLLRSLAQAH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgcagacagtagcgatcctcgactttgaaaccaccggcctgtcacctgcgcaaggcgac
cgggcaacggaaattgccgtcattctgtggcgcgacggtcagatcgtggatcgttaccaa
agcctgatgaatgccgggcgccgcattccctccgacgtcgcggcgttgaccggcatcacg
aacgacatgatcgcctcggcgccgcccgtcgcacaggtcatgcgcgaggcggcggcattc
gtcggccactgcccggtcgtcgcccataacgccggcttcgacaaacgcttctggcaggca
gaactcgccatgctgggcgcacgtgccgatcacgccttcgcttgcacgatgctcagcgcc
cggcggctttacccgcacgcgccgaatcaccggctctcgagccttgcgcaactgctccgg
ctaccgcagaccggccgcgcccaccgggccatggtggatgctgaaatgacggtgcacctc
tggcatcgcatgcatgacgacattacgcgcacctacggcctgaaacgggtcgaccacgcg
ctcatgtcacgcgtgcaagccaccagcaaggacaaggtgccgaccttgctcagatcgctc
gcacaagcccattga
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