Pandoraea vervacti: UC34_16025
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Entry
UC34_16025 CDS
T03688
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pve
Pandoraea vervacti
Pathway
pve03030
DNA replication
pve03410
Base excision repair
pve03420
Nucleotide excision repair
pve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UC34_16025
03410 Base excision repair
UC34_16025
03420 Nucleotide excision repair
UC34_16025
03440 Homologous recombination
UC34_16025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pve03032
]
UC34_16025
03400 DNA repair and recombination proteins [BR:
pve03400
]
UC34_16025
Enzymes [BR:
pve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UC34_16025
DNA replication proteins [BR:
pve03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
UC34_16025
DNA repair and recombination proteins [BR:
pve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
UC34_16025
NER (nucleotide excision repair)
GGR (global genome repair) factors
UC34_16025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AJP58070
LinkDB
All DBs
Position
complement(3674027..3676765)
Genome browser
AA seq
912 aa
AA seq
DB search
MSEQQSLEGKTLLLVDGSSYLYRAYHALPDLRGPSGEPTGALHGIVNMLRRMRKDVHAEY
SACVFDAKGKTFRDDWYPEYKANRPSMPDDLRAQIEPIHEAVRAMGWPLLMIDGVEADDV
IGTLARQAAERGMRVVVSTGDKDLAQLVNDRVTLVNTMTNETLDAPAVLAKFGVPPERIV
DYLTLVGDTVDNVPGVEKCGPKTAVKWLTQYGDLDNLVAHAAEVKGAVGENLRRALDWLP
MGRKLVTVALDCDLAPQVTSIEASLQTQPEDAEVLRDFFSRHGFKTLLREAEAAVASQAG
EPAPAPMADTIERQYEAVLTWEQFDAWLKTIEAAELTAFDTETTSLDAMQAQLVGLSFSC
EPGRAAYLPVAHRAPGEVEQLPRDEVLARLKHWLESPDHKKVGQNLKYDAHVLENYGIVL
GGIAHDTLLQSYVLESHRSHDMDSLASRHLGVTTVKYEDVCGKGAKQIGFDEVTIERATE
YAAEDADITLRLHRALYPDVAREATLEFVYRDVEMPTARVLQRMERNGVLVDTARLAAQS
DEIGRKLITLENEAYTLAGQQFNLNSPKQIGDIFFTQLQLPVVKKTASGAPSTDEEVLQK
LAEDYPLPKVLLEYRGLAKLKSTYTDKLPKMVNPATGRVHTNYAQAVAITGRLASNDPNL
QNIPVRTAEGRRIREAFIAPPGSQLVSADYSQIELRIMAHISGDESLLRAFANGEDIHRA
TAAEIFAVTPLEVSSEQRRYAKVINFGLIYGMSAFGLAANLGIERDAAKQYIDRYFMRYP
GVARYMDETRKSAKARGYVETVFGRRLWLPDINGGNGPRRQAAERAAINAPMQGTAADLI
KLSMIAVQRWLDDSGLQTRQIMQVHDELVLEVPDHELAEVRKRLPELMCGVAKLKVPLVA
EVGVGENWEQAH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacagcaaagtctggaaggtaagacgctcttattggtcgatggttcgagttat
ctttatcgagcctatcacgccctgccggatttgcgcgggcccagcggcgagcctacgggc
gcgctgcacggcatcgtcaatatgctgcgccgcatgcgtaaagacgttcatgcagagtac
agcgcttgcgttttcgatgcaaagggcaagacgttccgcgacgactggtatcccgagtac
aaggcgaaccgtccgtcgatgccagacgatctgcgtgcgcagatcgaaccgattcacgaa
gccgtgcgcgcgatgggctggccgcttctcatgatcgacggcgtcgaagcggacgacgtc
atcggcacgctcgccaggcaggcggccgagcgcggcatgcgcgtggtcgtctcgaccggc
gacaaggatctggcgcagctcgtgaacgaccgtgtgacgctcgtcaacacgatgaccaac
gaaacgctcgacgctcccgcggtcctcgcgaagttcggcgtgccgcccgagcgcatcgtc
gattacctgacgctggtgggcgacaccgtcgacaatgtgccgggcgtcgagaagtgcggc
ccgaagacggccgtcaaatggctcacgcaatacggcgatctggataacctcgtcgcgcac
gcggcggaagtgaagggcgccgtcggcgagaacctgcgtcgtgcgctcgactggctgccc
atggggcgcaagcttgtcacggtggcgctcgattgcgatctcgcgccgcaggtcacctcc
atcgaagccagtctgcaaacccagcccgaagacgctgaagtgctgcgcgatttcttttcg
cgccacggcttcaagacgttgctgcgcgaagcggaagcggccgtggcatcgcaagccggc
gagccagcgccggcgccgatggccgacactatcgagcgacagtacgaggctgtgctgacg
tgggagcaattcgatgcgtggctgaagaccatcgaggctgccgagttgacggcattcgat
acggagacgacatcgctcgacgcgatgcaggcgcaactcgtcggtctgtcgttctcatgc
gagccggggcgcgccgcataccttccggtcgcgcatcgcgcaccgggcgaagtcgaacag
ttaccgcgcgacgaagtgctcgcacgcctgaagcactggctcgagagccccgatcacaag
aaggttggacagaacctgaagtacgacgcgcacgtgctggagaactacggcatcgtgttg
ggcggcatcgcgcacgacacactgcttcagtcgtatgtgctcgaatcgcaccgcagccac
gatatggatagcctcgcgtcgcgccatctcggtgtgacgacggtgaagtacgaggacgtc
tgcggcaagggcgcgaagcagatcggcttcgatgaggtcacgatcgagcgggccaccgaa
tatgccgcggaggatgccgacatcacgctgcgtctgcatcgtgcgctgtatccggacgtg
gcgcgcgaggccacgctcgaattcgtttatcgcgatgtcgaaatgccgacggcgcgcgtg
ctccagcgcatggagcgaaacggtgtgctggtcgataccgcccggctggcggcgcaaagc
gacgaaatcggtcgcaagctgatcacgctcgagaatgaggcctatacgctggccggtcag
cagttcaacctgaattcgcccaagcagatcggcgatattttcttcacgcaattgcaactg
cccgtcgtcaagaagacggccagcggtgcgccgtcgaccgatgaggaagtcctgcaaaag
cttgcggaggactacccgctgccgaaggtattgctcgagtatcgggggctggccaagctg
aagtcgacgtataccgacaagttgccgaagatggtcaatccggcgaccggtcgcgtgcat
acgaactacgcgcaggcagtggcgatcacggggcggctggcgtcgaacgatccgaacctg
caaaacattccggtgcgcacggccgaaggccgtcgcattcgcgaagcgttcattgcgccg
ccgggcagccaactggtgtcggctgactactcgcagatcgaactgcgcatcatggcccat
atttcgggcgacgaaagcctgctgcgtgcatttgcgaacggcgaggacattcaccgcgcg
acggcagcggagatctttgccgtgacgccgctggaagtctcgtccgagcagcggcgctac
gccaaggtcatcaactttggcctgatctacggcatgagcgccttcggtctggcggcgaac
ctcggcatcgagcgtgacgccgccaagcagtacatcgaccgctacttcatgcgctacccc
ggtgtggcgcgctacatggacgagacgcgcaagagcgccaaggcgcgcggctacgtcgag
acggttttcggccgtcgtctgtggctaccggatatcaacggcggcaacgggccgcgccgt
caggcggccgagcgcgccgccatcaatgcgccgatgcagggcacggccgctgacctcatc
aagctctccatgattgccgtgcagcgctggctcgacgatagcggcctgcaaacgcgtcag
atcatgcaggtgcacgacgaactggtgctcgaagtgcccgaccatgaactggcggaagtt
cgcaagcgcctgccggagttgatgtgcggcgtggctaagctcaaggtaccgctcgtggcc
gaagtcggcgtgggggagaattgggagcaggcgcactga
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