Pandoraea vervacti: UC34_16285
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Entry
UC34_16285 CDS
T03688
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pve
Pandoraea vervacti
Pathway
pve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UC34_16285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pve03019
]
UC34_16285
03110 Chaperones and folding catalysts [BR:
pve03110
]
UC34_16285
03029 Mitochondrial biogenesis [BR:
pve03029
]
UC34_16285
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pve04147
]
UC34_16285
Enzymes [BR:
pve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
UC34_16285
Messenger RNA biogenesis [BR:
pve03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
UC34_16285
Chaperones and folding catalysts [BR:
pve03110
]
Heat shock proteins
HSP60 / Chaperonin
UC34_16285
Mitochondrial biogenesis [BR:
pve03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
UC34_16285
Exosome [BR:
pve04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
UC34_16285
Exosomal proteins of other body fluids (saliva and urine)
UC34_16285
Exosomal proteins of breast cancer cells
UC34_16285
Exosomal proteins of colorectal cancer cells
UC34_16285
Exosomal proteins of bladder cancer cells
UC34_16285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DNA_ligase_OB
Motif
Other DBs
NCBI-ProteinID:
AJP58107
LinkDB
All DBs
Position
complement(3732459..3734081)
Genome browser
AA seq
540 aa
AA seq
DB search
MSAKDVKFHDSARSRIVKGVNVLADAVKVTLGPKGRNVLIERSFGAPTITKDGVSVAKEI
ELKDRFENMGAQVVKQVASKTADVAGDGTTTATVLAQAIVQEGMKHVAAGMNPMDLKRGI
DKAVAAVLEELRKLSKPISTNKEIAQVGSISANSDEAIGKIIADAMEKVGKEGVITVEDG
KSLENELDVVEGMQFDRGYLSPYFINDPEKQAAYLDDALILLHDKKISAIRDLLPILEAA
AKAGKPLLIVAEDIEGEALATLVVNAMRGILKVVAVKAPGFGDRRKAMLEDIAILTGATV
ISEETGKQLEKATLDDLGSAKRVEVRKEDTIIIDGAGDAKRIEARVKQIRVQIDEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKRDRVDDALHATRAAVEEGIVPGGGVALL
RARSAVSNLKGANADQDAGIQIVLRALEAPLRVIASNAGDEPSVVIAKVRDGKGNFGYNA
ATGDYGDLVEIGVVDPTKVTRTALQNAASIAGLILTTDATIAEAPKDEKPAQVPAPELDY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaaagacgtcaaattccatgacagcgcccgcagccgaatcgtcaagggcgtg
aacgtgctggccgacgcagtaaaggtgaccctcggcccgaaaggtcgcaatgtgctgatc
gagcgcagctttggcgcgccgaccatcacgaaggacggtgtgtccgttgcgaaagaaatc
gagctgaaagaccgcttcgaaaacatgggtgcgcaggtggtcaagcaggtggcgtcgaaa
acggccgacgtggctggcgatggcaccacgacggctaccgtcctcgcccaggcgatcgtg
caggaaggcatgaagcacgtcgcggccggcatgaacccgatggatctcaagcgtggtatc
gacaaggcggtggccgccgtgctcgaagaactgcgcaagctgtcgaagccgatttcgacc
aacaaggaaatcgcgcaggtcggttcgatctctgcgaactcggatgaggcgatcggcaag
atcattgccgacgccatggagaaggtcggcaaggaaggcgtgatcacggtcgaagacggc
aagtcgctcgagaacgaactcgacgttgtcgagggcatgcagttcgatcgcggctatctg
agcccctacttcatcaacgatccggaaaagcaggcggcgtacctcgacgacgcattgatc
ctgctgcacgacaaaaagatctccgcgatccgcgacctgctgccgattctcgaagcggcc
gcgaaggccggcaagccgctgttgatcgtcgctgaggacatcgaaggcgaagcgctcgcc
acgctcgtggtcaatgcgatgcgcggcatcctgaaggtcgtcgcggtcaaggcgccgggc
ttcggcgaccgtcgcaaggcgatgctcgaagacatcgcgattctgactggcgcgaccgtg
atttccgaggagaccggcaaacagctcgaaaaggccacgctcgacgaccttggcagcgcg
aagcgcgtggaggtgcgcaaggaagacaccatcatcatcgatggcgcgggcgacgcgaag
cgcatcgaggcgcgcgtgaaacagatccgcgttcagatcgacgaggcgacttccgactac
gaccgtgaaaagctgcaggaacgcgtggcgaaacttgcgggcggtgttgcggtgatcaag
gtcggcgcagcgaccgaagtcgagatgaaggagaagcgggatcgcgtggacgacgcgttg
cacgccacgcgcgcggccgtcgaggaggggatcgtgccgggcggtggtgttgcgctgttg
cgtgcgcgctcggccgtgtcgaatctgaaaggcgcgaacgccgatcaggacgcgggtatc
cagatcgtgttgcgtgcgctcgaagccccgttgcgcgtgatcgcatcgaacgcaggcgac
gagccgtcggtcgtgatcgcgaaggtgcgcgacggcaagggcaacttcggctacaacgcg
gccaccggcgactatggcgatctggtcgaaatcggcgtggtcgatccgaccaaggttacg
cgcacggcgttgcagaacgcggcgtccatcgccgggctgatcctcaccacggatgcgacg
atcgccgaagcgccgaaggacgagaagcccgcgcaggtacccgcgccggagctcgactac
tga
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