Pandoraea vervacti: UC34_18910
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Entry
UC34_18910 CDS
T03688
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pve
Pandoraea vervacti
Pathway
pve03030
DNA replication
pve03430
Mismatch repair
pve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UC34_18910
03430 Mismatch repair
UC34_18910
03440 Homologous recombination
UC34_18910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pve03032
]
UC34_18910
03400 DNA repair and recombination proteins [BR:
pve03400
]
UC34_18910
Enzymes [BR:
pve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UC34_18910
DNA replication proteins [BR:
pve03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UC34_18910
DNA repair and recombination proteins [BR:
pve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UC34_18910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
AJP59917
UniProt:
A0ABN4FXA0
LinkDB
All DBs
Position
complement(4353052..4356633)
Genome browser
AA seq
1193 aa
AA seq
DB search
MRPMSEPRFVHLRLHSEYSIADGIVRLDDVVKAAAKDGQGALALTDLANMFGAIRFYKEA
RGKGVKPIIGCDAWITNPADRDKPSRLLLLARDREGYLNLCQLLSKAWLTNQYRGRAEIE
SSWLAADGLARGLLALSGAQMGDVGAALAAGNPDLALQCAKHWASVFPGAFYIELQRTGQ
QGMESYVQQAVQLAAKAGLPVVATHPIQFMTADDFTAHEARVCISEGEMLGNARRVRRFT
QDQSFRTQDDMIAAFEDVPSAIANTVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVQ
LSKEGLETRLALLFPDEAERDKQRPEYYKRLDFETGTIIKMGFPGYFLIVADFIQWAKNN
GVPVGPGRGSGAGSLVAYALGITDLDPLKYNLLFERFLNPERVSMPDFDIDFCQDGRDRV
IQYVKDKYGADAVSQIATFGSMAAKAAVRDVGRVLDLGYNFVDGISKLIPFKPGKHVTIE
DALKEEPQLAERYQTEDEVKQLIELAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQG
SGEDASGVVSQYDKDDVEAVGLVKFDFLGLTTLTILNWAERYIKRLHPEMADWSLDQVSL
TDPAAFSILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCA
RKHGREKTEYPDPRVEPVLQETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKAE
EMAEHREIFAKGAAENGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHH
PAEFMAANMSLAMDDTDKVKILYEDCLSPANGLGVLPPDVNVSAYRFEPADSKTVRYGLG
AIKGSGQSAIEEILRAREDKPFTDLFDFCARIDRRVVNRRTIEALIRAGAFDSIHENRAQ
LMASVPMAMEAADQASAAANQVSLFDLGDESLQAPLELADVPAWTDKRKLQEEKQALGFY
LSGHMFDSYAEEVRRFVRTRIRDLSEGRDRLVAGVISSMRTMMTQRGKMLIVQLDDGTGT
LEVTIFNEQFEANKHLFKEDELLIVHGNARPDSFTGGLRFTVESLMDLGRARARYARALK
LSFNGNADWNRLRATLQPHCTMYRVAATAGAGGGGFNGGGGGGGNGSGGFGRRNGNGDGD
ADKQTGLPVHIVYRRPDAECESRLGDDWKVQPGDELLGELRQWLTTDSVQVIY
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atacggcccatgtcagaacctcgcttcgtccacctccgtctccactccgaatactcgatc
gccgatggcatcgtgcggctcgacgacgtcgtcaaggccgccgccaaggatggtcagggc
gcgctcgcgcttaccgacctggcgaacatgttcggggccatccgtttctacaaggaagct
cgcggcaagggcgtcaagccgatcatcggttgcgacgcctggatcacgaatcccgccgat
cgcgacaagccctcgcgattgctgctgctcgcgcgcgaccgggaaggctatctgaacctg
tgtcagttgctctcgaaggcatggctgaccaatcagtaccgtggtcgggcggagatcgag
tcgtcgtggctcgccgctgacggtctcgcacgcggcctgctcgcgctgtccggcgcgcag
atgggcgacgtgggggcggcgttggccgccggcaaccccgatctggcgttgcaatgcgcg
aaacactgggcgagcgtgttccccggtgcgttctacatcgagctgcaacgcaccggccag
cagggcatggaatcgtatgtccagcaggcggtgcagttggcggcaaaggccggtctgccg
gtcgtcgccacgcatccgatccagttcatgacggccgacgatttcaccgcgcacgaagcg
cgtgtgtgtatttcggaaggcgagatgctcggcaacgcccggcgcgtgcgccgcttcacg
caggaccagagcttccgcacgcaggacgacatgatcgccgcgttcgaagacgtgccgtcc
gccattgccaacaccgtcgaaattgccaagcgctgcaatctgacgctcgaactcggcaag
ccgaagctgccgttgttcccgacaccggacggcatgtcgctcgacgactacctcgtgcag
ttgtccaaggagggactggagacgcgcctcgcgctgctgttcccggacgaagccgagcgc
gacaagcagcggcccgagtattacaagcgtctggacttcgagaccggcacgatcatcaag
atgggcttccccggctacttcctgatcgtggccgacttcattcagtgggcaaagaacaat
ggcgtgccggtcggtccgggccgcggctcgggcgccggttcgctcgttgcgtacgcactg
ggcattaccgacctcgacccgctcaagtacaacctgctgttcgagcgcttcctgaatccg
gaacgcgtctcgatgcccgacttcgacatcgacttctgtcaggacggtcgcgatcgcgtc
attcagtacgtgaaggacaaatacggcgcggacgccgtctcgcagatcgccaccttcggc
tcgatggcggcgaaggcggccgtgcgcgacgtggggcgtgtgcttgacctcggctacaac
tttgtcgacggcatctccaagctgattccgttcaagccgggcaagcacgtcactatcgag
gacgccctcaaggaagagccacagctcgccgagcgctaccagacggaagacgaagtcaag
cagctcatcgagctggcgcagcgcgtggaagggctcacgcgtaacgtcggcatgcacgcg
gggggcgtgctgatcgccccgggcaagctcaccgacttctgcccgctctacacgcaaggc
agcggcgaagacgccagcggcgtggtgagccagtacgacaaggacgacgtggaagcggtc
ggcctcgtgaagttcgactttcttggcctgacgaccctcacgatcctgaattgggccgag
cgctacatcaagcgcctgcacccggagatggcggactggtcgctcgatcaggtctcgctc
accgatccggcagcgttcagcattctgaagaaggccaacacggttgcggtgttccagctg
gaaagccgaggcatgcagggcatgctcaaagatgcccagcccgaccgcttcgaggacatc
atcgcgctggtggcgttgtatcgtccgggcccgatggacctgattccgagtttctgcgcg
cgcaagcacggccgcgaaaagaccgaatacccggatccgcgcgtcgagccggtgctccag
gagacctacggcatcatggtctaccaggagcaggtgatgcagatggcgcagatcatcggc
ggttattcgctcggcggcgccgacttgctgcgtcgtgcgatgggtaagaagaaggccgag
gaaatggccgagcaccgggagattttcgccaagggtgctgccgagaatggactcacgcgc
gaaaagtcggacgaaatcttcgacttgatggaaaagttcgcgggctacggcttcaacaag
tcgcacgccgccgcgtacgcgctgctcgcctactacaccgcatggctcaaggcgcaccat
cccgccgaattcatggccgccaacatgagcttggccatggacgacacggacaaggtcaag
attctctacgaagattgtctgtcgccggccaacggactgggcgtgctgccgccggacgtc
aatgtctccgcctatcggttcgagccggcggactcgaagacggtgcgctatggcctgggc
gcgatcaagggcagcggccagtcggccatcgaggaaatccttcgcgcccgtgaggacaag
cccttcaccgatctgttcgacttctgcgcgcgtatcgaccgtcgcgtggtgaatcgccgc
acgatcgaagcactgattcgtgccggcgcgttcgactccattcacgagaaccgggcgcag
ttgatggcgtccgtgccgatggcgatggaagccgccgatcaggcgagcgccgccgccaat
caggtcagcctgttcgaccttggcgatgaaagtctgcaagcgccgctcgaactggcggac
gtgccggcgtggaccgacaagcgcaagttgcaggaagagaagcaggcgctcggcttctac
ctgtcgggccacatgttcgattcgtacgcggaagaagttcgtcgcttcgtacgcacgcga
attcgcgacctgtccgaaggtcgcgaccggctcgtggccggtgtgatctccagcatgcgc
accatgatgacgcagcgcgggaagatgctgatcgtgcagttggacgacggcacgggcacg
ctcgaagtgacgatcttcaacgaacagttcgaagcgaacaagcatctgttcaaggaagac
gaactcctgatcgtgcacggcaacgcgcgccccgacagttttacgggcgggctgcgcttc
accgtggagagcctgatggatctcggccgggcgcgggcgcgatatgcgcgggcgctcaag
ctgtcgttcaatggcaacgccgactggaatcgtctgcgcgccacgcttcagccgcactgc
acgatgtaccgtgtcgcagcgacggccggggcgggtggcggcggctttaatggtggcggt
ggcggtggcggcaatggcagcggcggtttcggtcgacgcaatggcaatggcgatggcgac
gcagacaagcagaccggcttgcccgtgcacatcgtgtatcgccgccccgacgccgagtgc
gagtcccgtcttggcgacgactggaaggtccagcccggcgatgaattgctcggcgagctt
cgccagtggctcacgaccgactcggtgcaggtcatctactga
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