Pandoraea vervacti: UC34_21970
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Entry
UC34_21970 CDS
T03688
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pve
Pandoraea vervacti
Pathway
pve03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UC34_21970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pve03400
]
UC34_21970
Enzymes [BR:
pve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
UC34_21970
DNA repair and recombination proteins [BR:
pve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UC34_21970
Prokaryotic type
UC34_21970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APD11528
LinkDB
All DBs
Position
5039005..5039688
Genome browser
AA seq
227 aa
AA seq
DB search
MPHAWKALVAPFVQSEAYAPLCQYVDAEVAAGKTVYPADIFHALRMTSPQDVKVVILGQD
PYHGDDHGIAQAHGMAFSVQHGVRVPPSLRNIYKEIERDLGIAPPAHGNLDAWAKQGVLL
LNTTLTVEAGNAASHAKPFKKGGWQACTDTLLCGLAAQQGPLVFMLWGSHAQAKAPLLSG
HGHLLLEAPHPSPLSAHRGFLGCGHFSAANVFLTQHGKSPIDWRVPA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
ctgccccacgcttggaaagcgctcgttgcgcccttcgtgcaaagcgaggcctacgcgccg
ttgtgccagtacgtcgacgccgaagtcgccgcgggcaagaccgtctatccggcggacatt
ttccacgcgttgcgcatgacctcgccgcaggacgtcaaggtcgtcatcctgggtcaggac
ccctatcacggcgacgatcatggcattgcccaggcgcacggcatggcgttctcggtgcag
cacggtgtgcgggtccccccgtcattgcgcaacatctacaaagaaatcgagcgcgatctg
gggattgcaccgcccgcacatggcaatctcgacgcgtgggcgaaacaaggcgtgttgctg
ctcaatacgacactgacggtggaggcaggcaacgctgcgagccatgcgaagccgttcaaa
aaggggggatggcaagcatgcacggatacattgctctgcgggctcgcagcgcaacaaggt
cccctcgtgttcatgttgtggggtagccatgcacaggcgaaagcaccgctgctctcaggt
cacggacacttgctgctcgaagcgccgcatccgtcgcccttgtcagcccatcgcggcttc
ctcggctgcggccacttcagcgccgccaacgtgtttctgacgcaacacggcaaatccccg
atcgactggcgcgtgcctgcatag
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