Pandoraea vervacti: UC34_22400
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Entry
UC34_22400 CDS
T03688
Name
(GenBank) transcriptional regulator
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
pve
Pandoraea vervacti
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pve03000
]
UC34_22400
Transcription factors [BR:
pve03000
]
Prokaryotic type
Helix-turn-helix
IclR family
UC34_22400
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR_C
MarR_2
TrmB
MarR
HTH_24
HTH_5
HTH_29
DUF977
HTH_11
HTH_20
wHTH-PRTase_assc
HTH_23
HTH_28
Xre-like-HTH
HTH_Crp_2
TFIIE_alpha
HTH_AsnC-type
RP-C
HTH_Cmi2_C
Dimerisation
DUF7342
HTH_9
Penicillinase_R
Rrf2
MksE
FeoC
HTH_36
AbiEi_4
GntR
DUF4423
HTH_27
SMC_Nse1
Put_DNA-bind_N
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
AJP60043
LinkDB
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Position
complement(5149630..5150418)
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AA seq
262 aa
AA seq
DB search
MSKYPNVRGLSRGLLVLRALNAMERGRATAQQLSEATGLHRTTVRRLLETLLEEGFVRRS
TSDDTFRLALAVRSLSEGFTDDERIATVAPPIMGQLMQRVVWPSDLTTPDGDAMIIRETT
HRFSPLSFHRAMVGRRLPMLFTAAGRAYFCMCPDAEREDILDLLRTGAGGELQQRFANDD
AFIRNLVRQTREDGFGSNHGDWLDQRKIGAVAVAIQTEGRVLASLNVIYLDQAVSRAEAE
RRFVPALQAAAAEMAAACAGLT
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaatacccgaatgtgcgcggtctgtcgcgcggcctgctggtactgcgggcgctc
aatgcgatggagcgcggacgcgccacggcgcagcagttgagcgaagcgacgggactgcat
cgcacaacggtacgcaggctgctggaaacgttgctggaggaggggttcgtgcgccgcagt
acctcggatgacacctttcggctggcgctcgcggtgcgatcgctgagcgaggggttcacg
gacgacgagcgcattgcgacggtggcgccgccgatcatggggcaactgatgcagcgagtc
gtgtggccgtcggatctgacgacgccggacggcgacgccatgatcattcgcgagacgaca
catcgtttcagtccgctgtcgtttcaccgcgccatggtggggcgacgtttgcccatgctg
ttcaccgctgccggtcgcgcttacttctgtatgtgtccggacgccgagcgtgaggacatt
ctcgatttgttgcgcacgggcgcgggaggcgagttgcagcagcgctttgcgaacgacgat
gcgttcatccgcaatcttgtgcgtcagacacgagaggacggcttcggctcgaatcatggc
gactggctcgaccagcgaaagatcggcgcggtggcggtggcgattcagacagagggccgc
gtgctcgcgagcctgaacgtcatttatctggatcaggcggtcagtcgtgcggaagccgaa
cgacgcttcgtccccgccttgcaggccgccgctgcggagatggcggcggcgtgcgcgggg
ttgacgtga
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