Pandoraea vervacti: UC34_23125
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Entry
UC34_23125 CDS
T03688
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pve
Pandoraea vervacti
Pathway
pve03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UC34_23125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pve03021
]
UC34_23125
03400 DNA repair and recombination proteins [BR:
pve03400
]
UC34_23125
Enzymes [BR:
pve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UC34_23125
Transcription machinery [BR:
pve03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UC34_23125
DNA repair and recombination proteins [BR:
pve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UC34_23125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
DNAPolymera_Pol
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AJP59063
UniProt:
A0A0C5JV26
LinkDB
All DBs
Position
complement(5292290..5296396)
Genome browser
AA seq
1368 aa
AA seq
DB search
MHYSFTEKKRIRKSFAKRPTVHKVPFLLATQLASYTSFLQADTLASERKPEGLQAAFSSI
FPIVSHNGFARLEFVSYLLGTPAFDVKECQQRGLTFCSALRAKVRLVILDKESPNKPVVK
EVKEQEVYMGEIPLMTSTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFKLMPE
GAQMEFVPERLRGEVARFDITDREGKVIVQKDKRVNAKHIRDLENANTKFISVPEDYLLG
RVLAKNVIDGDTGEVIANANDEITESVLVKLRESGVSDIQTLYTNDLDQGSYISATLRID
ETADQTAARIAIYRMMRPGEPPTEDAVEALFNRLFYSEEAYDLSKVGRMKFNRRVGRDEV
LGPMTLEDDDILATIKILVDLRNGRGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFLETPYRKV
VDGKVTDQIDYLSAIEEGRYVIAQANASIGANGELTDELVSSREAGETLMVTPDRIQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKAVVGTGIERTVAVDSGT
TVQAFRGGVVDYVDAGRVVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPIVEVG
DKVARGDVIADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISERVVAEDRYTSIHIE
ELNVVARDTKLGPEEITRDISNLAEVQLSRLDESGIVYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELK
GYRLDLNDQLRIVEGDAFQRLERFLVGKTANGGPKKLAKGTKITKEYLADLDRYHWFDIR
LADDEGAQQLEQIKESIEQKRHSFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPIEDMPYMADGRPADIVLNPLGVPSRMNVGQILESHLGWAA
KGLGWRIGEMLQAHTKVQEIRKFLTKIYNESGQQEDIDSLSDDEVMSLARNLQNGVPFAT
PVFDGAHEEEIRRMLDLAFPDHIAKELGMTKSKNQVTLYDGRTGEAFERTVTCGFMHMLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVTGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLERG
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcactattccttcaccgagaagaaacgcattcgcaagagttttgcgaagcgtccgacc
gtgcacaaggtgccgtttttgctggccacccagctcgcctcgtacacatcgttcttgcaa
gccgatacgcttgcatcggagcggaagccggagggtctgcaagcagccttctcctccatt
ttcccgatcgtttctcacaacgggttcgcacgcctcgagttcgtcagctatctgctcggc
actcccgcgttcgatgtcaaggaatgtcaacagcgcggcctgaccttctgctcggccctg
cgcgccaaggttcgtctggtgattctcgacaaggaatcgccgaacaagccggtagtgaag
gaagtcaaggaacaggaagtgtacatgggcgaaattccgctcatgacctcgacgggttcc
ttcgtcatcaatggcacggaacgtgtcatcgtctcgcagctgcaccgctcgcccggcgtg
ttcttcgaacacgacaagggcaagacgcacagctcgggcaaactgctgttctccgcgcgt
atcattccgtaccgcggctcgtggctcgacttcgaattcgatccgaaggacatcctgtac
ttccgcgttgaccgccgtcgcaagatgccggtcacgatcctgctcaaggctatcggcctg
acgccggaacagatcctcgcgaacttcttcgtgttcgacaacttcaagctgatgccggaa
ggcgcacagatggagttcgtgccggagcgtctgcgcggtgaagtcgcgcgtttcgacatt
acggatcgcgaaggcaaggtcatcgtccagaaggacaagcgcgtcaacgcgaagcacatt
cgcgatctggagaacgccaacaccaagttcatctcggtgccggaagactatctcctcggc
cgtgtgctcgccaagaacgtgatcgatggcgataccggtgaagttatcgccaacgccaac
gacgaaatcaccgaaagcgtgctggtcaagctgcgcgagtcgggcgtgtcggacatccag
acgctgtacacgaacgatctggatcagggttcgtacatctcggccacgctgcgtatcgac
gaaaccgccgaccagacggcagcgcgtatcgcgatttatcgcatgatgcgcccgggcgag
ccgccgaccgaagatgcggtcgaggccctgttcaaccgtctgttctacagcgaagaagcg
tacgacctgtcgaaggtgggtcgtatgaagttcaaccgccgtgtcggccgcgacgaagtg
ctcggcccgatgacgctggaagacgacgacattctcgcgaccatcaagatcctcgtggat
ctgcgtaacggccgcggcgaagtcgacgacatcgaccacctgggtaaccgtcgtgtgcgt
tgtgtcggcgaactggcggaaaaccagttccgcgccggtctggtgcgtgtcgagcgtgct
gtgaaggaacgtctgggtcaggccgaatcggaaaacctgatgccgcacgacctgatcaac
agcaagccgatttcgtcggccattcgcgagttcttcggttcgtcgcagctgtcgcagttc
atggaccagaccaacccgctgtcggaaatcacgcacaagcgtcgtgtgtccgcactgggc
ccgggcggtctgacgcgcgagcgcgcaggctttgaagttcgtgacgtgcacccgacccac
tatggccgcgtgtgcccgatcgaaacgccggaaggtccgaacatcggtctgatcaactcg
ctggcactgtacgcccgcctgaacgaatacggcttcctggaaacgccgtatcgcaaggtg
gtggacggcaaggtcaccgaccagatcgactacctgtcggccattgaagaaggtcgctac
gtgatcgctcaggcgaacgcgtcgatcggcgccaacggcgaactcaccgacgaactggtg
tcgtcgcgtgaagccggcgaaacgctgatggtcaccccggaccgcatccagtacatggac
gtggcgccgtcgcagatcgtctcggtcgcagcttcgctgatcccgttcctcgagcacgat
gacgcgaaccgcgcattgatgggctcgaacatgcagcgccaggccgtgccttgcctgcgc
ccggaaaaggcggtcgtcggtacgggtatcgaacgtacggtggctgtcgactcgggtacg
accgtgcaggcgttccgtggcggtgtggtcgattacgtcgacgccggccgtgtggtgatt
cgcgtgaacgacgatgaagccgttgccggtgaagtcggcgtggacatctacaacctgatc
aagtacacgcgttcgaaccagaacaccaacatcaaccagcgcccgatcgtggaagtgggc
gacaaggtggcgcgcggcgatgtgatcgccgacggcgcgtcgaccgacctgggtgagctg
gcgctgggtcagaacatgctgatcgcgttcatgccgtggaacggctacaacttcgaggac
tcgatcctgatctcggagcgtgtcgttgcggaagaccgttatacgtcgatccacatcgaa
gagctgaacgtggtcgctcgcgacacgaagctcggaccggaagaaatcacgcgcgacatc
tcgaacctggcggaagtgcaactgagccgtctggacgagtcgggcatcgtgtacatcggt
gcggaagtcgaagcgggcgacgtgctggtgggcaaggtcacgccgaagggcgaaacccag
ctcacgccggaagaaaagctgctgcgcgcgatcttcggcgagaaggcgtcggacgtgaag
gacacctcgctgcgcgtgccgtcgggcatgagcggcaccgtcatcgacgtgcaggtgttc
acgcgtgaaggcattcagcgcgacaagcgtgctcagcagatcatcgacgatgagctgaag
ggctatcgcctggacctgaacgaccagctgcgtatcgtggaaggcgacgcattccagcgt
ctggagcgtttcctggtcggcaagacggccaacggcggcccgaagaagctggccaagggc
accaagatcaccaaggaatacctggccgatctggatcgctaccactggttcgacattcgt
ctggcggacgacgaaggtgcgcaacagctcgagcagatcaaggaatcgatcgagcagaaa
cgtcactcgttcgacctcgccttcgaagagaagcgcaagaagctcacgcaaggcgacgaa
ctgccgccgggcgtgctgaagatggtcaaggtgtacctggcggtcaagcgtcgtctgcaa
cccggcgacaagatggccggccgtcacggtaacaagggtgtggtctcgaagatcgtgccg
atcgaggatatgccgtacatggccgacggccgtccggcggacatcgtgctcaacccgctc
ggcgtgccgtcgcggatgaacgtgggtcagattctcgaatcgcacctcggctgggcagcg
aaggggctgggctggcgcatcggcgaaatgctgcaagcgcacaccaaggtccaggaaatt
cgcaagttcctgacgaagatctacaacgagagcggtcagcaagaagatatcgacagcctg
tcggacgacgaagtcatgtcgctcgcacgcaacctgcagaacggcgttccgttcgcgacg
ccggtgttcgacggtgcgcatgaagaggaaatccgtcgcatgctggatctggcgttcccg
gatcacatcgcgaaggaactcggcatgaccaagtcgaagaaccaggtcacgctgtacgac
ggtcgcacgggcgaagccttcgagcgtacggtcacgtgcggcttcatgcacatgctcaag
ctgcaccacctggtcgacgacaagatgcacgcacgttcgaccggtccgtactcgctggtg
acgcaacagccgttgggcggtaaggctcagttcggtggtcagcgcttcggtgaaatggaa
gtgtgggcactggaagcctacggcgcatcgtatgtgctgcaggaaatgctgacggtgaag
tcggatgacgtgacgggtcgtacgaaggtgtacgagaacctcgtgaagggcgatcacgtg
atcgatgccggtatgccggagtcgttcaacgtgctggtcaaggaaatccgttcgctcggt
atcgatatcgacctggagcgcggttaa
DBGET
integrated database retrieval system
