Pandoraea vervacti: UC34_23520
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Entry
UC34_23520 CDS
T03688
Name
(GenBank) pyridoxamine 5-phosphate oxidase
KO
K21131
GDP-4-dehydro-6-deoxy-alpha-D-mannose 3-dehydratase [EC:
4.2.1.168
]
Organism
pve
Pandoraea vervacti
Pathway
pve00541
Biosynthesis of various nucleotide sugars
pve01100
Metabolic pathways
pve01250
Biosynthesis of nucleotide sugars
Module
pve_M01017
GDP-L-Col biosynthesis, GDP-Man => GDP-L-Col
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
UC34_23520
Enzymes [BR:
pve01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.168 GDP-4-dehydro-6-deoxy-alpha-D-mannose 3-dehydratase
UC34_23520
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Motif
Pfam:
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJP59117
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Position
complement(5387374..5388540)
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AA seq
388 aa
AA seq
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MKFKFPLATTTWDQAEYAAMQAVIESGMFTMGPKVAEFEKRFAEYQGSKYAVMVNSGSSA
NLIMVAALMYTRDEALKLSPGDEVIVPAVSWSTTYYPLYQYGLSIKFVDIDLNTLNYDLD
ALAGAISDRTRAIMAVNLLGNPNDFAAIRHLIGERNIVLMEDNCESMGAEFEGRKAGSFG
VMGTFSSFFSHHISTMEGGLIVTDNEELYHILLSLRAHGWTRNLPKHNHVCGEKSDDPFK
ESFRFVLPGFNLRPLEMSGAIGIEQVRKLPELISLRRVNGAHFQEAMSHHPDLLIQRETG
ASSWFGFSLVIRPGSSLTREKLLARLNDLGFESRPIVTGNFAKNEVIKYFDYSIHGQLSN
ADHIDANGVFVGNHHYSIREAIDTLRTI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaagtttccgttggctacgacaacctgggatcaggcggaatacgccgcaatg
caggcggtcatcgaatcgggcatgttcacaatgggcccgaaggttgccgagttcgaaaag
cgctttgcggagtaccaaggcagcaagtatgccgtgatggtgaattcggggtcgtcggcc
aacctgatcatggtggcggcgttgatgtacacgcgcgacgaggcgctgaaattgtcgccc
ggcgacgaggtcatcgtgccggccgtgtcctggagcacgacgtactatccgctgtaccag
tacgggctgtcgatcaagttcgtcgacatcgatctgaatacgctgaattacgatctcgat
gcgctggccggcgccatcagcgatcgcacgcgcgcgatcatggccgtcaacctgctgggc
aacccgaacgattttgccgccattcgtcacctgatcggcgagcgcaacatcgttctgatg
gaagacaactgcgaatcgatgggtgccgagttcgaaggccgcaaagccggttcgttcggt
gtcatgggcacgttcagttctttcttctcgcaccacatctcgacgatggaaggcgggctc
atcgtaacggacaacgaggagctgtatcacattctgctttcgttgcgcgcgcacggctgg
acacgaaacctgcccaagcataaccacgtttgtggcgagaagagtgacgatccgttcaag
gagtcgttccgcttcgtgttgccgggcttcaacctgcgtccattggaaatgtcgggtgcc
atcggcatcgagcaggtgcgcaagctgccggagctcatttcgctgcgccgcgtgaacggc
gcacactttcaggaagcgatgagccatcacccggacctgctgattcagcgcgaaaccggt
gcgagcagttggttcggcttcagcctcgtgatccgtccgggttcgtcgctcacgcgcgag
aagttgctggcgcgcctgaacgatctcggtttcgaaagccgcccgatcgtcacggggaat
tttgccaagaacgaagtgatcaagtatttcgactactcgattcacggacaactgtcgaac
gcggaccatatcgacgccaacggcgtgttcgtcggcaatcatcactactccattcgcgaa
gccatcgacactttgcgaacgatctga
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