Paracoccus versutus: E3U25_06425
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Entry
E3U25_06425 CDS
T09188
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
pver
Paracoccus versutus
Pathway
pver02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pver00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E3U25_06425 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pver03021
]
E3U25_06425 (rpoD)
Transcription machinery [BR:
pver03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E3U25_06425 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
WGR55612
LinkDB
All DBs
Position
pBEN:complement(1318880..1320862)
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AA seq
660 aa
AA seq
DB search
MAANDEDQKPEAKDDDPSLDMSQAAVKRMIAEGRERGFITYDQLNAVLPPEQVSSDQIED
VMSMLSEMDIRVVENDEEAEEAEPGGELTTTGSGSRELTVATAETEKLDRTDDPVRMYLR
EMGSVELLSREGEIAIAKRIEAGRNTMIAGLCESPLTFKAITMWRQELLDEDILLRDVID
LETTFGRSMDEDGEEEEVLPTETRPAAGNGAAREEEEFDADGNPMGREEDEDEDDGQNLS
LAAMEASLKPKVLETLEAIARGYEELSHMQDNRMSATLNEDGTFSAAQESAYQELRSRIV
ALVNELHLHNNRIEALVDQIYGINRRIVTIDSNVVKLADAARINRREFIDAYRGSELDPT
WVERMMQHKGRGWQALFEKSRTQVESLRAEMAMVGQHVGVDIEEFRRIVSQVQRGEKESR
QAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATW
WIRQAITRSIADQARTIRIPVHMIETINKLVRTGRQMLHEIGREPTPEELAEKLQMPLEK
VRKVMKIAKEPISLETPIGDEEDSQLGDFIEDKNAVLPLDSAIQENLKETTTRVLASLTP
REERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDQ
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaacgacgaagaccagaagcccgaggccaaggacgacgatccttcgctggac
atgtcgcaggccgcggtcaagcgcatgatcgccgaagggcgcgagcgcggcttcatcacc
tatgaccagctcaatgccgtcctgccgcccgaacaggtcagttccgaccagatcgaggat
gtcatgtccatgctgtcggaaatggacatccgcgtggtcgagaacgacgaggaggccgag
gaggccgaaccgggcggcgagctgaccaccaccggctcgggctcgcgcgagctgaccgtc
gccaccgccgagacggaaaagctggaccgcaccgacgacccggtgcgcatgtatctgcgc
gagatgggctcggtcgagctgctgtcgcgcgagggcgagatcgccatcgccaagcgcatc
gaggccggccgcaataccatgatcgccgggctttgcgaaagcccgctgaccttcaaggcc
atcaccatgtggcgccaggagcttctggacgaggacatcctgctgcgcgacgtgatcgac
ctcgagaccaccttcggccgctcgatggacgaggacggcgaggaagaagaggttctgccg
accgagacccgtcccgccgcaggcaacggtgccgcgcgcgaagaggaagagttcgacgcc
gacggcaaccccatgggccgcgaggaggacgaggacgaggacgacggccagaacctgtcg
ctggccgcgatggaagcctcgctgaagcccaaggtgctggagacgctggaggccatcgcc
cgcggctacgaagagctgtcgcacatgcaggacaaccgcatgtcggcgacgctgaacgag
gacggcaccttctcggccgcgcaggaaagcgcctatcaggagctgcgttcgcgcatcgtc
gcgctggtgaacgagctgcacctgcacaacaaccgcatcgaggcgctggtcgaccagatc
tatggcatcaaccgccgcatcgtcaccatcgattccaacgtggtgaagctggccgatgcc
gcgcgcatcaaccggcgcgaattcatcgacgcctatcgcggcagcgagctggacccgacc
tgggtcgagcgcatgatgcagcacaagggccgcggctggcaggcgctgttcgagaaatcc
cgcacccaggtggaaagcctgcgcgccgagatggccatggtcggccagcatgtcggcgtg
gacatcgaggagttccgccgcatcgtcagccaggtccagcgcggcgaaaaggaatcgcgc
caggccaagaaggaaatggtcgaggcgaacctgcgcttggtgatctcgatcgccaagaaa
tacacgaacaggggcctgcaattccttgatctcattcaggaaggcaatatcggcctgatg
aaggccgtggacaagttcgagtatcgccgcggctacaagttctcgacctatgcgacctgg
tggatccgccaggcgatcacgcgaagcatcgccgaccaggcccggaccatccgcatcccg
gtccacatgatcgagacgatcaacaagctggtgcgcacggggcggcagatgctgcacgag
atcggccgcgagcccacgcccgaggaactggccgaaaagctgcagatgccgctggaaaag
gtccgcaaggtgatgaagatagccaaggagccgatcagcctcgaaaccccgatcggggac
gaggaggacagccagcttggcgatttcatcgaggacaagaacgccgtcctgccgctcgac
tcggccattcaggaaaacctgaaggagacgacgacgcgggtgctggccagcctgaccccg
cgcgaggagcgggttttgcggatgcgcttcggcatcggcatgaacaccgaccacacgctg
gaagaggtcggccagcagttcagcgtcacccgcgaacgcatccgccagatcgaggccaag
gcgctgcgcaagctgaaacatcccagccggtcgcgcaagctgcggtccttcctggaccag
taa
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