Paracoccus versutus: E3U25_10790
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Entry
E3U25_10790 CDS
T09188
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
pver
Paracoccus versutus
Pathway
pver03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pver00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E3U25_10790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pver03019
]
E3U25_10790
03009 Ribosome biogenesis [BR:
pver03009
]
E3U25_10790
Enzymes [BR:
pver01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
E3U25_10790
Messenger RNA biogenesis [BR:
pver03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E3U25_10790
Ribosome biogenesis [BR:
pver03009
]
Prokaryotic type
rRNA processing factors
E3U25_10790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
WGR56425
LinkDB
All DBs
Position
pBEN:2199164..2201854
Genome browser
AA seq
896 aa
AA seq
DB search
MSKKMLIDATHSEETRVVVVDGTKVEEFDFETVNKRQLAGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFAEIHPDYYQIPAADRKALIEEERQAAAAEADEGEKKRSPRRRKPAKAAA
ADSGDAVVVSDEIAGMAVLDPSEGEAAGGEDLAVAVAEAAPLATAEDAAAVAPDAADEPA
GDDAAENDGIESVAEEDVAEEISPPRKPRARRYKIQEVIKVRQIMLVQVVKEERGNKGAA
LTTYLSLAGRYCVLMPNTARGGGISRKITNAADRKKLKEIASELEVPEGAGLIIRTAGSQ
RTRTEIRRDYEYLMRLWEQIRELTFKSIAPAPIYEEGDLIKRTIRDLYSKEIDEVLVEGE
RGYRTAKDFMKMIMPSHAKNVKHYTDPMPLYARYQVESYLAGMFNPVVQLKSGGYIVIGV
TEALVAIDVNSGRATKEGSIEDTALKTNLEAAEEIARQLRLRDLAGLIVIDFIDMEERKN
NAAVEKRFKDKLKTDRARIQVGRISGFGLMEMSRQRLRPGMLESTTQPCPHCHGTGLIRS
DDSLALTILRAIEEEGTRKRSREVLVKAPVAVANFLMNAKREHIANIEARYGLSVRVEAD
PALISPDYAIEKFKTATRNVPEVVSPVVSVDARLMAQIDDEEPVEEEVEEIAEEEDRAED
SHAEGGENGEGGENGSKRRRRRRRRRGGKNGEGEASHAEDGLDHAEEGAEDAASEAEPAE
QPAEAEVTPAEAVAEVVAEAENAVEADADAAEKPRRRTRTRRRKTEEPSDAAADAPQAGV
EAGPAVEAVEPVAEPVVEAASADAAQDAQAEEPIAEAAADQAAEAEAEAEAAGPVATDAE
EAAAAEPEAAEHETAVAEAESTVAPEAVPAPMPEPAPAAANEESARPKRRGWWSLG
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaaaatgctgatcgacgccacgcattccgaggaaactcgggttgtcgtggtg
gatggaaccaaagtcgaggaatttgatttcgagacggtcaacaagcggcagcttgctggc
aacatctacctggccaaggtgacgcgggtcgaaccctcgctgcaggccgccttcgtggat
tacggcggcaatcgccacggcttcctggcctttgccgagatccatcccgattactaccag
atccccgccgccgaccgtaaggcgctgatcgaggaagaacgccaggccgccgccgccgag
gccgacgagggcgagaagaagcgtagcccgcgccgccgcaagccggccaaggccgctgcc
gccgacagcggcgatgccgtcgtggtctcggacgagatcgcggggatggccgtgctggac
ccctcggaaggcgaggccgcggggggcgaggatcttgcggtggccgtggccgaggccgca
ccgctggcgacggccgaggatgctgccgcggtcgcccccgatgcagccgacgagccggca
ggcgatgacgccgccgagaacgatggcatcgaatcggtcgccgaggaggatgtggccgag
gagatctcgcccccccgcaagccccgcgcgcgccgctacaagatccaggaggtgatcaag
gtccggcagatcatgctggtccaggtcgtcaaggaggagcggggcaacaagggcgccgcg
ctgaccacctatctgtcgctggccggccgctattgcgtgctgatgcccaataccgcgcgc
ggcggcgggatttcccgcaagatcaccaatgccgccgaccgcaagaagctgaaggagatc
gccagcgagctggaggtgccggaaggcgccgggctgatcatccgcaccgccggcagccag
cggacacggacggaaatccgccgcgactacgaatacctgatgcgactgtgggaacagatc
cgtgagctgaccttcaagtccatcgcgcccgcgccgatctatgaggaaggcgacctgatc
aagcgcacgatccgcgatctctacagcaaggagatcgacgaggtcctggtcgagggcgag
cgcggctatcgcacggccaaggacttcatgaagatgatcatgccgtcccatgccaagaac
gtgaagcattacaccgacccgatgccgctttacgcgcgctatcaggtggaaagctatctg
gccggcatgttcaacccggtcgtgcagctgaaatccggcggctatatcgtcatcggcgtc
accgaggcgctggtcgccatcgacgtgaactcgggccgggccaccaaggaaggctcgatc
gaggacaccgcactgaagacgaacctggaggccgccgaggaaatcgcccgccagctgcgc
ctgcgcgacctggccgggctgatcgtcatcgacttcatcgacatggaggagcgcaagaac
aacgccgccgtcgagaagcgcttcaaggacaagctcaagaccgaccgggcgcgcatccag
gtcgggcgcatctcgggcttcggcctgatggagatgtcgcgccagcgcctgcggccgggg
atgctggaatcgaccacgcagccctgcccgcattgccacggcaccgggctgatccgttcg
gacgacagcctggcgctgaccattctgcgcgccatcgaggaagagggcacccgcaagcgg
tcccgcgaggtgctggtcaaggcgccggtcgcggtggcgaacttcctgatgaacgccaag
cgcgagcatatcgccaatatcgaggcgcgctatgggctgtcggtccgggtcgaggccgat
ccggcgttgatctcgcccgattacgcgatcgagaagttcaagaccgcgacccgcaatgtg
cccgaggtggtctcgcccgtggtttcggtcgatgcccggctgatggcgcagatcgacgac
gaggagccggtcgaggaagaggtcgaggagatcgccgaggaggaagaccgcgccgaggac
agccatgccgaaggcggcgagaatggcgaggggggcgagaacggcagcaagcgccggcgt
cgccgccgccgtcgccgcggcggcaagaacggcgagggcgaggcgtcccatgccgaggat
ggcttggatcacgccgaggagggtgccgaggatgcggcctctgaagccgagccggccgag
cagcccgccgaagccgaggtgacgccggccgaggccgtggcggaagtggtggccgaggcc
gagaatgcggtcgaagccgatgccgacgccgccgagaagccgcgccgccgcacccggacc
cgccgccgcaagacggaagagccgagcgacgccgccgcggacgcgccgcaggcgggtgtt
gaggcggggcctgccgtcgaggcggtcgagcccgtcgcggagcctgtcgtggaggccgcg
tcggcggatgctgcgcaggatgcgcaggccgaggagccgattgccgaggctgctgccgat
caggcggccgaggccgaggcggaggcggaagctgccggacccgtggcgaccgacgccgag
gaagccgcagccgcggaacccgaggccgcggagcacgagaccgccgtggcggaggccgaa
tcgaccgttgcacccgaggccgtaccggcgcccatgcccgagccggctccagctgccgcg
aacgaagagtcggcgcgtcccaagcgtcgcggctggtggtccctgggctga
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