Paracoccus versutus: E3U25_11405
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Entry
E3U25_11405 CDS
T09188
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pver
Paracoccus versutus
Pathway
pver03030
DNA replication
pver03430
Mismatch repair
pver03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pver00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E3U25_11405
03430 Mismatch repair
E3U25_11405
03440 Homologous recombination
E3U25_11405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pver03032
]
E3U25_11405
03400 DNA repair and recombination proteins [BR:
pver03400
]
E3U25_11405
Enzymes [BR:
pver01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E3U25_11405
DNA replication proteins [BR:
pver03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E3U25_11405
DNA repair and recombination proteins [BR:
pver03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E3U25_11405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
PAS
Motif
Other DBs
NCBI-ProteinID:
WGR56684
LinkDB
All DBs
Position
90837..92816
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AA seq
659 aa
AA seq
DB search
MLTQLSLRARVLLIFAGLAGAVLAILAAALWVAGASLTGRGVPVQAMLDALALAALIAGF
GALGMIVWIWFLFDRNVARPIELLAGGLRTGQTPEIEEARYLADLGPAARDAAEARARSA
EALADAVAEHAADLQREKEALESILADIGAGAVMTDPAGRVMFYNASAAHLLPGIALDRP
IERHLPGGALEAGAARLAAGAAATDLTCLTSAGQRLWGRMRRVDGGTLLILNDRPPQHPA
PRDLLETLRRHAATLVPMLGALEGPIPPALAQAIQSEGQGLANVLRVLTEAMSGDAPRGG
AGLNELAAGLDLAPDQPRLVLLADAAGVNGLLRHLDRRLREQGAAPRLAAEAEAGAEASE
ARLLLLWTGAALPMDRLEAWLAEPPDPAQPELTGHEILAAHATGIWTEARDGQARLVLPL
PIAPGRPDSAGLTYDFALSRRGAASSRLADLTCVVFDTETTGLDPAADRIVQIAGLRIAR
GRLTGERFDTLVDPGRPIPPASTAVHGITDAMVAGAPDMTAALTAFHHFAEDTVLVAHNA
PFDMGFLRRAVPETGAHFDNQVLDTVLLSAMLWGQSVPHSLDALTERLGIIIPPEARHTA
MGDARATAEAYLRLIAALEAKGLERFEDILAEARRHRRLIDNANKPAGETASDPGPGAG
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgcagctgtcgctgagggctcgggttctgttgatctttgccgggcttgcgggc
gccgtcctcgcgatcttggcggcggcgctgtgggtggcgggggcaagccttacgggccgg
ggcgtcccggtccaggcgatgctggacgcgctggcgcttgcggcgctgatcgcggggttc
ggcgcgttggggatgatcgtctggatctggttcctgttcgaccgcaacgtggcccgcccg
atcgaactgctggccgggggcttgcgcaccggccagacccccgagatcgaggaggcccgc
tatcttgccgatctgggccccgccgcgcgcgacgccgccgaggcgcgggcgcgttcggcc
gaggcgctggccgatgcggtcgccgaacatgccgccgacctgcaacgcgagaaggaggcg
ctggaatccatccttgccgatatcggtgccggcgcggtgatgaccgatccggccggacgg
gtgatgttttacaacgcctccgccgcgcatctcttgccgggcatcgcgctggaccgcccc
atcgagcgccatctgcccggcggcgcgttggaggccggggcggcgcgtctggcggcgggg
gcggcggcgacggacctgacctgcctgacctcggccgggcagcggctgtgggggcgcatg
cgacgggtcgatggcggcacgctgctgatcctgaacgaccgtccgccgcagcatcccgcg
ccgcgcgacctgctggagactctgcgccgccatgccgcgaccctggtgccaatgctgggt
gcgttggagggaccgatcccgcctgctctggcgcaggcgatccagagcgaggggcaggga
ttggccaatgtcctgcgcgtactgaccgaggcgatgagcggtgacgccccgcgcggaggg
gctgggctgaacgaactggccgccgggctggacctggcgcccgaccagcctcggctggtg
ctgctggctgacgcggccggcgtgaacgggctgctgcgccatctggaccgccgcctgcgc
gaacagggtgcggccccccgccttgccgccgaggccgaggccggggccgaggcgtccgag
gcgcggctcttgctgctctggaccggggcggcgctgcccatggaccggctggaggcctgg
ctggccgaaccgcccgatccggcgcagcccgaactgaccgggcacgagatcctggccgcg
catgccaccggcatctggaccgaggcgcgggacggtcaggcgcggctggttctgccactg
ccgatcgcgccgggccggccggacagcgccgggctgacctatgacttcgccctgtcgcgg
cgcggcgcggcctcgtcgcggctggccgatctgacctgcgtggtcttcgacaccgagacg
accgggcttgaccccgccgctgaccgcatcgtgcagatcgccgggctgcgcatcgcccgc
ggccgcctgaccggcgagcgtttcgacacgctggttgatcccggccggccgatcccgcct
gcctcgaccgccgtgcatggcatcacggatgcgatggtggccggtgcccctgacatgacc
gcagcactgaccgcctttcaccatttcgccgaggatacggtgctggtcgcccataacgca
cccttcgacatgggcttcctgcgccgcgccgtgcccgagaccggggcgcatttcgacaat
caggtgctggatacggtgctgctttcggcgatgctctggggccagtcggtgccgcattcg
ctggatgcgctgaccgagcggcttggcatcataatcccgcccgaggcgcgccacaccgcc
atgggcgacgcccgcgcaacggccgaggcctatttgcggctgatcgcggcactagaggcc
aaggggctggaacgattcgaggacatactggccgaggctcgccgccaccgccgcctgatc
gacaacgccaacaagccggcaggcgagaccgcctccgaccctgggccgggggcaggctga
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