Paracoccus versutus: E3U25_16630
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Entry
E3U25_16630 CDS
T09188
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pver
Paracoccus versutus
Pathway
pver03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pver00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E3U25_16630 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pver03021
]
E3U25_16630 (rpoC)
03400 DNA repair and recombination proteins [BR:
pver03400
]
E3U25_16630 (rpoC)
Enzymes [BR:
pver01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E3U25_16630 (rpoC)
Transcription machinery [BR:
pver03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E3U25_16630 (rpoC)
DNA repair and recombination proteins [BR:
pver03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E3U25_16630 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
WGR57598
LinkDB
All DBs
Position
complement(1124381..1128589)
Genome browser
AA seq
1402 aa
AA seq
DB search
MNQELATNPLNPLAAPRQFDEIKISLASPEEILAWSYGEVKKPETINYRTFKPERDGLFC
ARIFGPIKDYECLCGKYKRMKYRGLVCEKCGVEVTLQKVRRERMGHIELAAPVAHIWFLK
SLPSRIGLMLDMTLRDLERILYFENYVVIEPGLTDLSYGQLLTEEEFLDAQDQYGADAFT
ANIGAEAIREMLANIDLAATAEQLREELKEATGELKPKKIIKRLKIVESFLESGNRPEWM
VLTVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKR
MLQESVDALFDNGRRGRVITGNNKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVT
GPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQAKKLVEKERPEVWDILDEVIR
EHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQ
LEARVLMMSTNNVLSPANGAPIIVPSQDMVLGLYYTTMEREGMKGEGMVFANLEEVEHAL
ASGAVHLHARITARLPQIDENGNEVIKRFETTPGRIRLGALLPKNAKAPFELVNRLLRKK
DIQNVIDTVYRYCGQKESVIFCDQIMGLGFREAFRAGISFGKDDMVVPPTKWELVEETQD
QVKQFEQQYLDGLITQGEKYNKVVDAWSKCNDRVTDAMMKTISATKKDENGAELEPNSVY
MMAHSGARGSVSQMKQLGGMRGLMAKPNGEIIETPIISNFKEGLTVLEYFNSTHGARKGL
SDTALKTANSGYLTRRLVDVAQDCIIREHDCGTERAITASAAVNDGEVVSPLSERVLGRV
AAEDVLVPGEDVVIVRKNELIDERKADEIEVAGVQNVRIRSALTCESDDGVCALCYGRDL
ARGTLVNIGEAVGIIAAQSIGEPGTQLTMRTFHIGGIAQGGQQSFIAAAQEGTVAFENES
TLENANGELIVMSRNMQLHIKGATGDTLASHKLFYGSKLFVREGDAVARGQKMFEWDPYT
LPIIAEKAGIAKYVDLISGISVRDETDDATGMTQKIVTDWRSAPKGNELKPEIIIVDQDG
EPVRNEQGNPVTYPMSVEAILSVEEGQEIRAGDVVARIPREGAKTKDITGGLPRVAELFE
ARRPKDHAIIAELDGYVRFGKDYKNKRRIAIQPADDTLEPVEYMVPKGKHIPVQEGDFVQ
KGDYIMDGNPAPHDILRIMGIEALADYLIDEVQDVYRLQGVKINDKHIEVIVRQMLQKIE
ILDSGDTTLLKGEHVDRDEFEEENAKIEAKGGRPATGEPVLLGITKASLQTRSFISAASF
QETTRVLTEAAVQGKRDKLVGLKENVIVGRLIPAGTGGATARVRRIATDRDHEVIEARRA
EAEAAAALIAPEDTPAEVGGDE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaacttgccaccaatcccctgaacccgctggctgcgccgcggcagttcgac
gaaatcaagatctcgctggcctcgcccgaggaaatcctcgcctggtcctatggcgaggtg
aagaagcccgagaccatcaactaccgcacgttcaagcccgagcgtgacggtctgttctgc
gcacgtatctttggcccgatcaaggactacgaatgcctctgcggcaaatacaagcgcatg
aagtatcgcggcctggtctgcgagaaatgcggcgtcgaggtgacgctgcaaaaggtccgg
cgcgagcgcatgggccatatcgagctggccgccccggtcgcgcatatctggttcctgaag
tcgctgccctcgcgcatcggcctgatgctggacatgacgctgcgcgaccttgagcgcatc
ctctatttcgagaactacgtcgtcatcgagccgggcctgaccgacctgagctatggccag
ctgctgaccgaagaggaattcctcgacgcgcaggaccagtatggcgccgacgccttcacc
gccaatatcggcgccgaggcgatccgcgagatgctggccaacatcgacctggccgccacc
gccgaacagctgcgcgaggagctgaaggaagcgacgggcgaactgaagccgaagaagatc
atcaagcgtctgaagatcgtggaatcgttcctcgagtcgggcaaccgtcccgagtggatg
gtgctgaccgttattccggtcatcccgccggaactgcgtccgctggtgccgctggacggc
ggccgctttgccacgtccgacctgaacgacctgtatcgccgggtcatcaaccgcaacaac
cgcctgaagcggctgatcgagctgcgtgcgcccgacatcatcgtgcgcaacgaaaagcgg
atgctgcaggaatcggtcgatgcgctgttcgacaacggccgccgcggccgcgtcatcacc
ggcaacaacaagcgcccgctgaaatcgctgtcggacatgctgaagggcaagcagggccgg
ttccgccagaaccttctggggaaacgggtcgacttctcgggccgttcggtcatcgtgacc
gggccggagttgaagctgcaccaatgcggcctgccgaagaagatggccttggaactgttc
aagccgttcatctattcgcggcttgaggccaaggggctttccagcaccgtcaagcaggcc
aagaagctggtcgagaaagagcgtcccgaggtctgggacatcctggacgaggtgatccgc
gaacatccggtgctgctgaaccgcgcgccgacgctgcaccgcctgggcatccaggccttc
gagccgatcctgatcgaaggcaaggcgatccagctgcacccgctggtctgctcggccttc
aacgccgacttcgacggcgaccagatggccgtccacgtcccgctgtcgcttgaggcgcag
ctggaagcgcgcgtgctgatgatgtccacgaacaacgtgctgtcgcccgccaacggcgcg
ccgatcatcgtgccgtcgcaggacatggtccttggtctctactacacgaccatggagcgc
gagggcatgaagggcgagggcatggtctttgccaacctcgaggaagtggaacacgcgctg
gcctccggcgcggtgcatctgcatgcccgcatcaccgcccgcctgccgcagatcgacgag
aacggcaacgaggtcatcaagcgcttcgaaaccacgcccggccgcatccgcctgggcgcg
ctgctgcccaagaacgccaaggcgcccttcgagctggtcaaccgcctgctgcgcaagaag
gacatccaaaacgtcatcgacaccgtctaccgctactgcggccagaaggaatcggtgatc
ttctgcgaccagatcatgggcctgggcttccgcgaggcgttccgcgccggcatttccttc
ggcaaggacgacatggtcgtgccgccgacgaaatgggagctggtcgaggagacgcaggac
caggtcaagcagttcgagcagcaatacctggacggcctgatcacccagggcgagaaatac
aacaaggtcgtcgatgcctggtcgaaatgcaacgaccgcgtcaccgacgccatgatgaag
accatctcggccaccaagaaggacgagaacggcgccgagctggagccgaactcggtctac
atgatggcgcattcgggcgcgcggggctcggtcagccagatgaagcagctgggcggcatg
cgcggcctgatggccaagccgaacggcgagatcatcgagacgccgatcatctcgaacttc
aaggaagggctgaccgttcttgaatacttcaactcgacccacggcgcgcgcaagggcctg
tcggacaccgcgttgaagacggcgaactcgggctacctgacccgccgcctggtggacgtg
gcgcaggactgcatcatccgcgagcatgattgcggcaccgagcgggcgatcaccgcctcg
gccgcggtcaacgacggcgaagtcgtcagcccgctttccgagcgcgtgctgggccgcgtc
gcggccgaggacgtgctggtgccgggcgaggacgtggtcatcgtgcgcaagaacgagctg
atcgacgagcgcaaggccgacgagatcgaggtggcgggcgtgcagaacgtgcgcatccgc
tcggccctgacctgcgaatcggacgacggggtctgcgcgctgtgctatggccgcgacctg
gcccgcggcacgctggtcaacatcggcgaggcggtcggcatcattgccgcccagtccatc
ggcgagccgggcacgcagctgacgatgcggaccttccacatcggcggcatcgcccagggc
ggccagcagtccttcatcgccgcggcgcaagagggcacggtggctttcgagaacgaaagc
acgctggaaaacgccaatggcgagctgatcgtgatgagccgcaacatgcagctgcacatc
aagggcgcgacgggcgacacgctggccagccacaagctgttctacggctcgaaactgttc
gtgcgcgaaggcgatgccgtggcgcgcggccagaagatgttcgaatgggatccctatacc
ttgccgatcatcgccgagaaggcgggtatcgcgaaatatgtcgacctcatcagcggcatt
tcggtccgcgacgagaccgacgacgcgacgggcatgacgcagaagatcgtgacggactgg
cgttcggcccccaagggcaacgagctgaagcccgagatcatcatcgtcgaccaggatggc
gagccggtgcgcaacgagcagggcaacccggtcacctatccgatgtcggtcgaggcgatc
ctgtcggtcgaggagggccaggagatccgcgccggcgacgtggtggcgcgtatcccgcgc
gagggcgccaagaccaaggacatcaccgggggtctgccccgcgtggcggaactgttcgag
gctcgtcgtcccaaggatcacgcgatcattgccgaactggacggctatgtgcgcttcggc
aaggactacaagaacaagcgccgcatcgccatccagcccgccgacgacacgctggagccg
gtcgaatacatggtgccgaaaggcaagcacatcccggtgcaggaaggcgacttcgtgcag
aagggcgactacatcatggacggcaacccggcgccgcatgacatcctgcgcatcatgggg
atcgaggctctggccgattacctgatcgacgaggtgcaggacgtctaccggctgcaaggc
gtgaagatcaacgacaagcacatcgaggtgatcgtccgccagatgctgcagaagatcgag
atcctcgacagcggcgacaccacgctgctgaagggcgagcatgtcgaccgcgacgagttc
gaggaagagaacgccaagatcgaagccaagggcggccgtccggccaccggcgagccggtg
ctgctgggcatcaccaaggcgtcgctgcagacccgcagcttcatctcggccgcctcgttc
caggagacgacccgcgtgctgaccgaggccgccgtgcagggcaagcgcgacaagctggtc
gggctcaaggagaacgtgatcgtcggccggctgatcccggccggcaccggcggggccacg
gcccgcgtgcgccgcatcgccaccgatcgcgaccacgaggtgatcgaggcgcgccgcgcc
gaggcggaagccgccgccgcgctgatcgcgccggaagacaccccggccgaggtcggcggc
gacgagtga
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integrated database retrieval system
