Paracoccus versutus: E3U25_22900
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Entry
E3U25_22900 CDS
T09188
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
pver
Paracoccus versutus
Pathway
pver03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pver00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E3U25_22900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pver03019
]
E3U25_22900
Messenger RNA biogenesis [BR:
pver03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E3U25_22900
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WGR58752
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Position
2369373..2371049
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AA seq
558 aa
AA seq
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MAERLIYLPLGGAGEIGMNAYVYGYGQPGRERLIVVDLGVTFGDMDSAPGIDLIMADVAW
LEQNRDRIDAIFITHGHEDHVGALGLLWPKLQKPVHCRRFTGALARLKLEEAGQPVDQLH
IHAPRPAVVTAGPFRVQFVPVSHSIPESSALIIDTPAGRIVHTGDFKLDGTPVVGEPFDP
ILWHDIAGEGQGVKVLTCDSTNVFSPHPGRSEAVLANPLLDFVMAQRQMVVATTFASNIA
RLKTLAEAGLAAGRKICLLGRAMRRMVTVGVETGILTNFPPVIGPEEASELPRDKVMLIV
TGSQGERRAASAQLSRGRYLGIELKEGDSFLFSSRTIPGNERGVIRIMNALSEMGVDLYD
GDDGTYHVSGHANRPDIEAVHDLLKPQIVIPMHGEHMHLREHAKLAQARGIPAAVATNGT
MLDLTGPVPRVVDQIDTGRLYLDGTVLIGAMDGVVRDRIRMALNGHAMVSVIIDEDDTPL
PDAWVELSGLPELGRAGVPLARNIESELAEFLERADDRTVMDDDRLEEAIRKITRQVSME
EIGKKPEVTVVISRLAAE
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcgcctgatctatctgccgctgggcggcgcgggcgaaatcggcatgaacgcc
tatgtctacggctacggccagccggggcgcgagcggctgatcgtcgtcgacctgggcgtg
accttcggcgacatggattctgcgccgggcatcgacctgatcatggccgatgtcgcctgg
ctagagcagaaccgcgaccgcatcgacgccatcttcatcacccatgggcacgaggatcac
gtcggcgcgcttggcctgctgtggcccaagctgcaaaagccggtgcattgccgccgcttc
accggcgcgctggcgcggctgaagctggaagaggccggccagcccgtcgaccagctgcat
atccacgccccgcgccccgcggtggtgacggccggtcccttccgggtgcaatttgtcccc
gtcagccattcgatcccggaaagctcggcgctgatcatcgacacgccggcgggccgcatc
gtgcataccggcgatttcaagctggacggcaccccggtggtgggcgagcccttcgacccg
atcctgtggcacgacatcgcgggcgaagggcagggggtcaaggttctgacctgcgattcc
accaatgtcttttccccccatcccggccggtccgaggcggtgctggccaatccgctattg
gatttcgtcatggcgcagcggcagatggtggtggcgacgaccttcgccagcaacatcgcc
cgcctcaagaccctggccgaggccggccttgccgccggccgcaagatctgcctgctcggc
cgcgccatgcgccgcatggtgacggtcggggtcgagaccggcatcctgaccaatttcccg
ccggtgatcggccccgaggaggcctcggaactgccgcgcgacaaggtgatgctgatcgtg
accggcagccagggcgagcgtcgcgccgccagcgcccagctgtcgcgcggccgctacctg
gggatcgagctgaaagagggggacagcttccttttcagctcgcgcaccatccccggaaac
gagcgcggggtgatccgcattatgaacgcgctgtcggaaatgggcgtggacctctatgac
ggggacgacggcacctatcacgtctcgggccatgccaaccgcccggacatcgaggcggtc
cacgatctgttgaagccgcagatcgtcatcccgatgcatggcgagcatatgcacctgcgc
gaacatgccaagctggcgcaggcgcgcggcattcccgcggcggtggcgaccaacggcacc
atgctggacctgaccggcccggtgccgcgggtggtggaccagatcgacaccggccggctt
tacctggacggcacggtgctgatcggcgccatggacggtgtggtgcgcgaccgcatccgc
atggcgctgaacggccatgccatggtctcggtcatcatcgacgaggacgacacgcccctg
ccagacgcctgggtggaactgtccggcctgccggaactgggccgcgccggcgtgccgctg
gcccgcaatatcgaaagcgagctggccgagttcctggaacgcgccgacgaccgcacggtg
atggacgacgaccgcctggaagaggcgatccgcaagatcacccgccaggtctcgatggag
gagatcggcaagaagcccgaggtgacggtggtgatctcgcgcctcgccgccgagtga
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