KEGG   Paracoccus versutus: E3U25_22900
Entry
E3U25_22900       CDS       T09188                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
pver  Paracoccus versutus
Pathway
pver03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pver00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    E3U25_22900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pver03019]
    E3U25_22900
Messenger RNA biogenesis [BR:pver03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     E3U25_22900
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: WGR58752
LinkDB
Position
2369373..2371049
AA seq 558 aa
MAERLIYLPLGGAGEIGMNAYVYGYGQPGRERLIVVDLGVTFGDMDSAPGIDLIMADVAW
LEQNRDRIDAIFITHGHEDHVGALGLLWPKLQKPVHCRRFTGALARLKLEEAGQPVDQLH
IHAPRPAVVTAGPFRVQFVPVSHSIPESSALIIDTPAGRIVHTGDFKLDGTPVVGEPFDP
ILWHDIAGEGQGVKVLTCDSTNVFSPHPGRSEAVLANPLLDFVMAQRQMVVATTFASNIA
RLKTLAEAGLAAGRKICLLGRAMRRMVTVGVETGILTNFPPVIGPEEASELPRDKVMLIV
TGSQGERRAASAQLSRGRYLGIELKEGDSFLFSSRTIPGNERGVIRIMNALSEMGVDLYD
GDDGTYHVSGHANRPDIEAVHDLLKPQIVIPMHGEHMHLREHAKLAQARGIPAAVATNGT
MLDLTGPVPRVVDQIDTGRLYLDGTVLIGAMDGVVRDRIRMALNGHAMVSVIIDEDDTPL
PDAWVELSGLPELGRAGVPLARNIESELAEFLERADDRTVMDDDRLEEAIRKITRQVSME
EIGKKPEVTVVISRLAAE
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggctgagcgcctgatctatctgccgctgggcggcgcgggcgaaatcggcatgaacgcc
tatgtctacggctacggccagccggggcgcgagcggctgatcgtcgtcgacctgggcgtg
accttcggcgacatggattctgcgccgggcatcgacctgatcatggccgatgtcgcctgg
ctagagcagaaccgcgaccgcatcgacgccatcttcatcacccatgggcacgaggatcac
gtcggcgcgcttggcctgctgtggcccaagctgcaaaagccggtgcattgccgccgcttc
accggcgcgctggcgcggctgaagctggaagaggccggccagcccgtcgaccagctgcat
atccacgccccgcgccccgcggtggtgacggccggtcccttccgggtgcaatttgtcccc
gtcagccattcgatcccggaaagctcggcgctgatcatcgacacgccggcgggccgcatc
gtgcataccggcgatttcaagctggacggcaccccggtggtgggcgagcccttcgacccg
atcctgtggcacgacatcgcgggcgaagggcagggggtcaaggttctgacctgcgattcc
accaatgtcttttccccccatcccggccggtccgaggcggtgctggccaatccgctattg
gatttcgtcatggcgcagcggcagatggtggtggcgacgaccttcgccagcaacatcgcc
cgcctcaagaccctggccgaggccggccttgccgccggccgcaagatctgcctgctcggc
cgcgccatgcgccgcatggtgacggtcggggtcgagaccggcatcctgaccaatttcccg
ccggtgatcggccccgaggaggcctcggaactgccgcgcgacaaggtgatgctgatcgtg
accggcagccagggcgagcgtcgcgccgccagcgcccagctgtcgcgcggccgctacctg
gggatcgagctgaaagagggggacagcttccttttcagctcgcgcaccatccccggaaac
gagcgcggggtgatccgcattatgaacgcgctgtcggaaatgggcgtggacctctatgac
ggggacgacggcacctatcacgtctcgggccatgccaaccgcccggacatcgaggcggtc
cacgatctgttgaagccgcagatcgtcatcccgatgcatggcgagcatatgcacctgcgc
gaacatgccaagctggcgcaggcgcgcggcattcccgcggcggtggcgaccaacggcacc
atgctggacctgaccggcccggtgccgcgggtggtggaccagatcgacaccggccggctt
tacctggacggcacggtgctgatcggcgccatggacggtgtggtgcgcgaccgcatccgc
atggcgctgaacggccatgccatggtctcggtcatcatcgacgaggacgacacgcccctg
ccagacgcctgggtggaactgtccggcctgccggaactgggccgcgccggcgtgccgctg
gcccgcaatatcgaaagcgagctggccgagttcctggaacgcgccgacgaccgcacggtg
atggacgacgaccgcctggaagaggcgatccgcaagatcacccgccaggtctcgatggag
gagatcggcaagaagcccgaggtgacggtggtgatctcgcgcctcgccgccgagtga

DBGET integrated database retrieval system