Prevotella veroralis: J5A55_01085
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Entry
J5A55_01085 CDS
T08190
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pvf
Prevotella veroralis
Pathway
pvf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J5A55_01085 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvf03019
]
J5A55_01085 (recQ)
03400 DNA repair and recombination proteins [BR:
pvf03400
]
J5A55_01085 (recQ)
Enzymes [BR:
pvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J5A55_01085 (recQ)
Messenger RNA biogenesis [BR:
pvf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J5A55_01085 (recQ)
DNA repair and recombination proteins [BR:
pvf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J5A55_01085 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
HTH_40
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QUB40889
LinkDB
All DBs
Position
1:complement(257627..259810)
Genome browser
AA seq
727 aa
AA seq
DB search
MTKELNLTEKLKHYFGFEKFKGDQEAIIRNLLAGHDTFVLMPTGGGKSLCYQLPSLIMEG
TAIVVSPLIALMKNQVDVINGISEEDGVAHYLNSSLKKAEIDKVRADIVSGRTKLLYVAP
ESLNKEENMAFLKSVKISFYAIDEAHCISEWGHDFRPEYRKIRYAIDTIGAAPVIALTAT
ATDKVRTDIIRSLGIEDCAEFKSSFNRPNLYYEVRAKRSDDDTSKQIIKFIKQHTGKSGI
IYCLSRKKVEELAAILQANDIKAAPYHAGLDSETRSKTQDDFLMEELDVIVATIAFGMGI
DKPDVRFVIHYDIPKSLEGYYQETGRAGRDGKEGICIVFYSKNDLKKLEKFMEGKPVAEQ
DIGRQLLQETEAYAESSVCRRKMLLHYFGEEYPKDNCCMCDNCLHPKKKIEAMNQLLIVL
QAVKALKENFRQEYVIDFVKGRATDDQKDHKHNELDDFGAGEDEDPKIWNPVVRQALLAG
YLKKDVENYGILKLTAAGKRFMKSPTSFMIVMDAEFKDEEDDDTPMAGTAVLDPELFSML
KNLRKKIARKLEIPPYVIFQDVSLEQMAMMYPINEEELQNIQGVGAGKAKRYGKEFCELI
RQHCEENHIERPEELRVRTVAKKSMQKVKIIQSIDRQLPLDDIASAEGLDFDDLLTKIEE
IVYSGTKLNIDYFLEDVYDDDTINDIYDYFMDSETDSLDVAMEELDGDYSEEVIRLVRIK
FLSEMAN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagagctcaatcttaccgaaaaacttaaacattactttggctttgagaagttc
aaaggtgatcaagaagccattatacgcaatcttcttgcaggacatgataccttcgtgcta
atgcctacaggtggtggtaaaagcctgtgttatcaacttccatcactgataatggagggt
acagctattgttgtttcgcctcttattgcattaatgaaaaaccaggtagatgtcatcaat
ggtattagtgaagaggatggtgtggcacattaccttaactcttctttaaagaaggcagag
atagataaggtgcgtgctgatattgtttcaggacgtacaaaactactttatgtagcccca
gaatctctcaataaagaggagaatatggcgtttctaaagtcggtgaagataagtttttat
gcgattgatgaggctcattgtatatctgaatggggacacgatttccgtccagaatatcgt
aagatacgttatgcaatagatactattggggctgcaccagtcattgcgctcactgcaaca
gcaaccgataaggtgcgaacggacatcattcgtagtcttggaatagaggattgtgccgag
tttaaaagctcttttaatcgtcctaatctatactatgaagtacgtgcaaagaggagtgat
gacgatacaagtaagcaaattattaagttcattaagcagcatactggcaaaagcggaatc
atctattgtctttcacgtaagaaggtggaagagttggcagccatccttcaagccaatgat
ataaaggctgcgccctatcatgcagggctcgattcggaaacgagatcgaagactcaagac
gacttccttatggaggagttggatgtaattgtggctacaatagcattcggaatgggtatt
gataagcctgatgttcgcttcgttatccattatgatataccgaagagtttggagggatat
taccaagagactgggcgtgctgggcgcgatggtaaggaaggaatctgcattgtcttttat
tcaaagaacgacttgaagaaactcgagaagttcatggaaggaaagcccgtagccgaacag
gacattggtagacagctgttacaagagactgaggcttatgcagaatcgtctgtttgtagg
cgtaagatgttgcttcattactttggtgaagaatacccaaaggataattgctgcatgtgt
gataactgtctgcatcctaagaagaagattgaggcaatgaatcagctcttgatagttctc
caagctgtgaaggctttgaaagaaaacttccgacaagagtatgtcattgactttgtcaaa
ggtagagcaacagatgatcaaaaagatcataagcacaacgagcttgatgacttcggtgct
ggcgaagatgaagacccgaagatatggaatcctgtggtcagacaagcactcttggctggt
tatctgaagaaggatgttgagaactatggcatattgaagttgaccgcagcaggcaaacgc
ttcatgaagtcgccaacgtcgtttatgatcgtaatggatgccgagtttaaggatgaagag
gatgatgatacaccaatggcgggcacagcagtcctcgatccagaacttttctccatgcta
aagaaccttcgtaagaagatagcacgtaagttagaaatccctccatacgtcatctttcag
gatgtatctttggagcagatggcaatgatgtatcctatcaatgaagaggaactacagaac
attcaaggagtaggagcaggtaaggcgaagcgttatgggaaagagttttgtgaattgata
aggcaacattgcgaagaaaaccacatcgaacgtcccgaagaactacgtgtgcgaacggtc
gcaaagaagtctatgcagaaggtaaaaatcatccaaagcattgacagacaactcccactt
gatgacattgcatcggctgaaggacttgatttcgatgatcttctcactaagattgaagag
atcgtttatagtggaacgaagctcaatatcgattacttcttagaggatgtttacgatgat
gatacaatcaatgacatctatgactacttcatggacagcgagacagatagccttgatgtg
gcaatggaagagcttgatggcgattatagtgaggaagtcatccgtttggtacgcataaag
tttctgtccgaaatggcaaactga
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