Prevotella veroralis: J5A55_03315
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Entry
J5A55_03315 CDS
T08190
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pvf
Prevotella veroralis
Brite
KEGG Orthology (KO) [BR:
pvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvf03032
]
J5A55_03315 (gyrA)
03400 DNA repair and recombination proteins [BR:
pvf03400
]
J5A55_03315 (gyrA)
Enzymes [BR:
pvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J5A55_03315 (gyrA)
DNA replication proteins [BR:
pvf03032
]
Prokaryotic type
DNA Topoisomerases
J5A55_03315 (gyrA)
DNA repair and recombination proteins [BR:
pvf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J5A55_03315 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
GDA1_CD39
DUF2153
Fe-S_assembly
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
QUB41289
LinkDB
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Position
1:783169..785757
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AA seq
862 aa
AA seq
DB search
MDENQTIDQDRIMKINIEEEMKSSYIDYSMSVIVARALPDVRDGFKPVHRRILFGMRGIG
NFSNQPYKKCARVVGEVLGKYHPHGDSSVYGALVRMGQEWNMRYKLVDGQGNFGSVDGDS
AAAMRYTECRLSKMGEHVMDDIEKDTVDMVNNFDDTLREPAVMPTKIPNLLVNGGNGIAV
GMATNIPTHNLGEVIDGCCAYIDNPEISTDGLMEFIPAPDFPTGAYIYGLQGVKDAYETG
RGRVVMRAKAEIESDENHDKIVVTEIPYGVNKQQLIEYIADLVKEGKLEGISNVNDETGR
QGMRIVVDVKRDANANVILNKLFKMTALQSSFSVNCIALVAGRPRLLSLRECIKYFVEHR
HDVTIRRAQFDLKKAQERAHILEALIKACDNIDEVVHIIRASKTPSDAQRNLEKRFDFDE
LQSKAIVDMRLSQLTGLRLDQLHQEFEELMQTIKDLQEILNNPERCKEVMKEELQEVKEK
YGDDRRTEIIPDEHEFNAEDFYPNDPVVITISHLGYIKRTPLADFKEQARGGVGSKGART
REKDFTEYIYPATMHQTMLFFTRKGRCYWMKCYDIPEGDKNSKGRAIQNMLSLDPGDSVN
AFLRIQGLDDDEFLDSHYVVFATKQGVVKKTSLRAYSRPRTNGVIAININDGDEVVDVRL
TNGHNELIIADRNGRACRFDESNIRTMGRVSTGVRGMRLDEDGQDEVIGMIVVNDPVNET
VMVVSEEGYGKRSQVEDYRLTNRGGKGVKTLNITDKTGKLVAIKNVTDDNDLMIINKSGI
VIRMSVAECRVMGRATQGVRLINLAKKNDIIASVCKVMSSEMESQVEDDSREQWAKTSEE
IKSDINSSSEVGEPDTTPVNFD
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaatcagacaattgatcaggacagaattatgaagatcaacatcgaggaggag
atgaaaagctcctacatcgactactctatgtcggtgattgtggcacgtgccctccctgat
gttcgtgatggtttcaagcctgttcatcgccgtatccttttcggtatgcgcggtatcggt
aactttagcaaccagccttataaaaagtgtgcccgcgttgttggtgaggtacttggtaag
tatcacccacatggtgactcttcagtctatggtgcgcttgtgcgtatgggacaggaatgg
aatatgcgctacaagttggttgacggacagggtaactttggttctgtcgatggtgactct
gctgctgcgatgcgttatactgagtgccgcctctcaaagatgggtgagcacgttatggac
gatatcgagaaggatacggttgacatggtcaacaacttcgacgatacgctgcgtgagcct
gctgtaatgcctacaaagattcctaacttgcttgtaaatggtggcaatggtattgccgtg
ggtatggcaacaaatattcctacgcacaacctcggtgaggttattgatggttgctgtgca
tacattgataatccggagatttctaccgacggattgatggagtttattcctgctccagac
ttcccaacaggtgcttatatttatggtcttcagggcgttaaagatgcctatgagactggt
cgtggtcgcgttgtaatgcgtgctaaggctgagattgagagcgatgaaaaccatgataag
attgttgtgacagagattccttacggagttaataagcagcaacttatcgaatatatcgct
gacctcgtgaaggaaggtaagcttgagggcatctctaacgtcaatgatgaaacgggtcgt
cagggtatgcgtatcgttgttgatgtgaagcgtgatgcgaatgcaaatgttattttgaat
aaactcttcaagatgacagcattacagagctctttctctgtaaactgcatcgcattggtt
gctggtcgtccacgtctgttgagccttcgcgagtgcataaaatactttgttgagcatcgt
cacgatgttactatccgccgtgcacaattcgacttgaagaaggcacaggaacgtgcacac
atcttggaggcattgattaaggcttgtgataatattgatgaggttgtacatattattcgt
gccagcaagacaccttcagatgcccaaagaaaccttgagaaacgttttgactttgatgag
cttcagtcaaaggcaatcgttgatatgcgtctgtcacagcttacaggtctacgtcttgac
caattgcatcaggagtttgaggaactcatgcaaaccattaaagatttgcaagagattctt
aataaccctgagcgttgtaaggaagtgatgaaggaagagttgcaggaggttaaggagaag
tatggcgatgaccgtcgtacagagattatccctgatgagcatgagtttaatgctgaggat
ttctatcctaatgaccctgttgttattaccattagccaccttggttatatcaagcgtact
ccgcttgcagacttcaaggagcaggctcgtggtggtgtaggttctaagggtgctcgcaca
cgtgagaaagacttcaccgaatatatctatccagcaaccatgcatcagacgatgttgttc
tttactcgtaagggacgctgctattggatgaagtgttatgacatcccagagggcgataag
aactcaaagggacgtgctattcagaatatgctctcacttgatccaggcgattctgttaac
gcattcttgcgtattcaaggcttggatgatgatgagttcctcgattctcactatgtagta
tttgcaacaaaacaaggtgtcgttaagaagacttctctccgtgcttattcacgtcctcgt
accaatggtgtgattgctatcaacatcaatgatggtgatgaggttgtagacgttcgtctg
acaaatggtcataacgaacttatcatcgctgaccgcaatggtcgtgcttgtcgcttcgat
gagtcaaatattcgtacaatgggtcgtgtgtctacaggtgtacgtggtatgcgtctggac
gaagatgggcaggatgaagttattggtatgattgttgttaatgaccctgttaacgagacg
gttatggttgtatctgaagagggttacggaaagcgctcacaggtagaagactaccgatta
accaatcgtggcggtaagggtgttaagacgctgaatattacggacaagactggtaaactt
gttgctattaagaacgttaccgatgacaacgacttgatgattatcaacaagagcggtatt
gttattcgtatgtctgttgctgaatgccgtgtaatgggtcgtgcaacacaaggcgtacgt
ctgataaacctcgctaagaagaatgatattatcgcatctgtttgtaaggtgatgagttca
gagatggagtcacaggttgaggatgatagtcgtgaacaatgggctaaaaccagtgaagaa
atcaagagtgacataaactcatcttctgaagttggtgagccagatacaaccccagtcaat
ttcgattaa
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