Proteus vulgaris: CRN77_02905
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Entry
CRN77_02905 CDS
T05486
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pvg
Proteus vulgaris
Pathway
pvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRN77_02905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvg03019
]
CRN77_02905
03400 DNA repair and recombination proteins [BR:
pvg03400
]
CRN77_02905
Enzymes [BR:
pvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CRN77_02905
Messenger RNA biogenesis [BR:
pvg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CRN77_02905
DNA repair and recombination proteins [BR:
pvg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CRN77_02905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ATM98735
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All DBs
Position
complement(664023..665852)
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AA seq
609 aa
AA seq
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MSTAEVLNSMPSAQAILRETFGYQQFRPGQQEIIHTITTGRDCLVVMPTGGGKSLCYQIP
ALLLDGLTVVVSPLISLMKDQVDQLCLHGIEAAYLNSTQTREEQFDVQMRCQKGEIKLLY
IAPERLMMESFLHQLVQWKPALLAVDEAHCISQWGHDFRPEYRGIGLLRQYLPDVPIIAL
TATADNTTRYDIINQLVLRDPLIHISSFDRPNIRYTLVEKYKPLDQLWLFIRGQKGKSGI
IYCNSRNKVEETAERLSKRGLSIAGYHAGMEIAQRAKVQEAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAVLFYDPADMAWLRRCLDEKPESDQ
KAIEMHKLNAMGAFAEAQTCRRLVLLNYFDEHRQNACGNCDICLDPPKQYDGLVDAQKAL
SCIYRTGQHFGIGYIVEILRGANNQRIRDSGHDTLPVYGIGKAQSHEHWVSVIRQLIHLG
MVTQNIVHRSALQLTEMARPILRGEVPLQLAVPRLLSPTKSRNQQTKNAHRQYDRKLFAK
LRKLRKSIADEENIPPFVVFNDVTLIEMAEQCPVYPDELLLINGVGQRKLERFGPAFMTL
IRDHIEGFE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgtccacagcagaagttcttaattcaatgccatcagcacaagctattttgcgagaaacc
tttggttatcagcaatttcgccctggtcagcaagaaatcatccataccattacaactgga
agagattgcctagttgtgatgccgacagggggtggtaaatccctttgttatcaaattccc
gcattattacttgatgggctgacagtggttgtttctccactcatctcactgatgaaagat
caggttgatcaactttgccttcatggtattgaagctgcttatttaaattcaacccaaacg
cgtgaagaacagtttgatgttcaaatgcgttgtcaaaagggtgaaataaaactgctgtat
attgcccctgagcgattaatgatggagagttttcttcatcaattagtacaatggaaaccc
gcattactcgctgttgatgaagcacactgtatttcacaatggggacatgatttccgtcct
gaatatcgcggcatagggttattaaggcaatatcttcctgatgttcccattattgcgctg
acggcaacggcggataatacaacacgttacgatataattaatcagttagtgttgcgtgat
ccgttaatccatatcagtagtttcgatagaccgaatatccgctacactttagtagagaaa
tacaaaccacttgatcagctttggttatttattcgtggtcagaaaggaaagtcaggcatt
atttactgtaatagtcgcaataaagtcgaagaaacagcagagcgcttgagtaaacgagga
ttaagcatagcgggttatcatgctggaatggaaattgcacaacgtgcgaaagtacaagaa
gcttttcagcgtgatgatttacaaattgtggtagccactgtcgcgtttggtatgggaata
aacaagcccaatgtccgatttgttgttcactttgatattccgcgaaatattgaatcttat
tatcaagaaacagggcgtgcagggcgagatgggctacctgcagaagccgtattattttac
gatcctgccgatatggcgtggttgcgtcgttgtttagatgaaaagccagaaagcgatcaa
aaggccattgaaatgcataagcttaatgcaatgggagcatttgctgaagctcaaacatgc
cgacgcttagtgttactaaattacttcgatgaacatcgacaaaatgcttgtggtaactgt
gatatttgccttgatcctcctaagcaatatgatggtttagtggatgcgcaaaaagcatta
tcttgtatttatcgtactggtcagcactttggtattggttatattgttgaaattttaaga
ggtgcgaataatcagcgtattcgagattcagggcacgatacattacctgtttatggtatt
ggtaaagcgcaaagtcatgagcattgggtgagtgttattcgtcagcttattcacctaggt
atggtgacacaaaatattgttcatcgctcggcattacaactgacagagatggcaaggcca
atcttacgtggtgaagtaccattacaattagctgtaccgagattattaagcccgacaaaa
agccgtaatcaacaaacaaaaaatgcccatagacagtacgatagaaaattgtttgcgaaa
ctacgtaaattacgtaagtctattgctgatgaagaaaacattccgccatttgtcgtcttt
aatgatgtcacattgattgaaatggcagagcagtgccctgtttatccagatgaactgtta
ttaataaacggtgttggacaacgaaaattagaacgatttggacccgcttttatgacactc
attcgtgaccatattgagggcttcgaataa
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