Proteus vulgaris: CRN77_05660
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Entry
CRN77_05660 CDS
T05486
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pvg
Proteus vulgaris
Pathway
pvg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pvg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CRN77_05660 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvg03021
]
CRN77_05660 (rpoB)
03400 DNA repair and recombination proteins [BR:
pvg03400
]
CRN77_05660 (rpoB)
Enzymes [BR:
pvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CRN77_05660 (rpoB)
Transcription machinery [BR:
pvg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CRN77_05660 (rpoB)
DNA repair and recombination proteins [BR:
pvg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CRN77_05660 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
SPG4
Motif
Other DBs
NCBI-ProteinID:
ATM99237
UniProt:
A0A6G6SMU0
LinkDB
All DBs
Position
1249223..1253251
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPDGQNGLEAAFRSVFPIQ
SYSGNAELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRAMNYSTEEILGLFFEKTLFEISNNKLMMT
LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKEQVDRIEVPVEYIAGKVVARD
YIDEATGELICAANMEISLDVLARLSQAGHKTIETLFTNDLDHGAYISETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAVGRMKFNRSLSRDEVEGSGIL
SQEDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDALMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRVVENNAVT
DEIHYLSAIEEGNFIIAQANSVLDDDNHFVEELVTCRHKGESSLFSRDQVQYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRGDKPLVGTGMERAVAVDSGVTAVAKR
GGVVQYVDASRIVIKVNEEETYAGEAGIDIYSLTKYTRSNQNTCINQTPCVSLGEPVDRG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNYEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEESQLREVKKDL
TEELRIFEAGLFARIRGVLIAGGIEAEKLDKLPRERWLELGIADEEKQNQLEQLAEQYDE
LKAEFAKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGNPVDLVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQKAYDLGMAPRQKVDLDTFSDEEVLRLAENLKKGMPTATPVFDGAEEMEIKEMLK
LADLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggatgttccctatctcctttctatccaacttgactcgttccagaagttcatcgag
caagatcctgatggtcaaaacggtctggaagcagctttccgttccgtatttcctatccaa
agctacagtggtaatgctgaattacaatatgtcagctaccgcttaggcgagcctgttttt
gatgttaaagaatgtcagatccgcggtgtaacttactcagcacctctgcgtgtaaaactg
cgtctggtcatttatgaacgtgaagccccagaaggcaccgttaaagacatcaaagaacaa
gaagtctatatgggtgaaatcccattaatgaccgataatggtacttttgttatcaatggt
actgagcgtgttatcgtttcccagttacaccgtagccctggtgtgttctttgatagtgac
aaaggtaaaacacactcttcaggtaaggtactgtataacgcacgtattatcccttatcgt
ggctcatggttagacttcgaattcgaccctaaagataacctttttgtccgtattgaccgt
cgccgtaaattacctgcgactatcattttacgcgcaatgaactacagcactgaagaaatc
ttaggattattcttcgaaaaaacactgtttgaaatcagcaacaacaagctgatgatgaca
ttagtgcctgaacgtctgcgtggtgaaactgcttcatttgatattgaagcaaacggcaaa
gtgtatgtcgaaaaaggccgtcgtattaccgctcgtcatattcgtcaattagaaaaagag
caagttgaccgcattgaagtacctgttgaatacattgcaggtaaagtggttgctcgtgac
tatattgatgaagcgacaggtgaactgatttgtgctgctaacatggaaatctctttagat
gtgttagctcgcttaagtcaagctggtcataaaacgattgaaactctgtttaccaatgat
ttagatcatggtgcttatatttcagaaactgttcgcgtcgatcctacaaacgatcgttta
agtgcgttagttgaaatctatcgcatgatgcgtcctggtgaaccacctacacgcgaagct
gcagaaaacttatttgagaacttattcttctctgaagatcgttatgatctttctgctgtg
ggtcgtatgaagttcaaccgttcgttaagccgtgacgaagttgaaggttctggcattctg
agccaagaagatatcattgaagtaatgaaaaaactgattgatatccgtaatggtaaaggt
gaagtggatgatatcgaccacttaggtaaccgtcgtattcgttctgttggcgaaatggct
gaaaaccaattccgtgttggtctggtgcgtgttgaacgtgcagttaaagaacgtctgtct
ttaggcgatcttgatgcattgatgccacaagatatgatcaacgcaaaaccgatttctgct
gctgtcaaagaattctttggctctagtcagttatcacagtttatggatcaaaataacccg
ctatcagaaattacgcacaaacgtcgtatttctgcattaggcccaggtggtttgacccgt
gaacgtgcaggctttgaagttcgagacgtacacccaactcactacggtcgtgtgtgccca
atcgaaacgcctgaaggtccaaacatcggtcttatcaactcattatctgtttatgcacag
actaacgagtacggtttcctagaaacgccttaccgtgttgttgaaaacaacgctgtaaca
gatgaaattcactatctgtctgcaatcgaagaaggtaacttcatcattgctcaggctaac
tccgtattagacgatgacaatcactttgttgaagaattagttacttgccgtcataaaggt
gagtcaagcttatttagtcgtgaccaagttcagtacatggacgtttcaacccaacaggtt
gtttctgtcggtgcttcactgatcccattccttgaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggctgttcctacacttcgtggtgataaaccactagta
ggtacaggtatggaacgtgcagtagcggttgactccggtgttactgcggttgctaaacgt
ggtggtgttgttcagtatgttgatgcttctcgtatcgttatcaaagttaacgaagaagag
acttacgctggtgaagcgggcatcgatatctacagcttgactaaatacactcgttctaac
cagaacacatgtattaaccaaactccttgcgtatctttaggtgaacctgttgatcgcggt
gacgtgttagctgatggtccttcaacagaccttggtgagctagcattaggtcaaaacatg
cgcgtggcatttatgccatggaatggttataactacgaggactccatccttgtatctgag
cgtgttgttcaagaagaccgtttcactactatccatattcaagaactcgcttgtgtctct
cgtgatactaagttagggcctgaagagatcactgctgatatcccgaacgtcggtgaagca
gcgttatctaaactggatgaatcaggtatcgtttatatcggtgctgaagtgaaaggcggt
gacattctggttggtaaagtaacacctaaaggtgaaactcaactaactccagaagagaaa
ctgctacgtgctatcttcggtgaaaaagcgtctgatgttaaagattcttctctacgtgtt
cctaatggtgtctctggtacagttatcgacgtacaagtcttcacccgtgatggcgtagaa
aaagataaacgtgcattagaaatcgaagaatcacagttacgtgaagttaagaaagactta
actgaagaactgcgtatctttgaagctggtctattcgctcgtatccgtggtgttctgatt
gctggcggtattgaagctgagaaattagataaattacctcgtgaacgttggttagagctg
ggtattgcggatgaagagaagcaaaaccagttagaacaattagctgaacagtatgatgag
ctgaaagctgagttcgcgaagaaactggaagctaaacgtcgtaaaatcactcaaggcgat
gatttagcacctggcgtgctgaaaatcgttaaggtttacctggctgttaaacgtcagatc
caacctggtgataagatggcgggtcgtcatggtaacaagggtgttatctctaagattaac
ccaattgaagacatgccatacgatgaaaacggtaatccagtagacctcgtactgaaccca
ctaggtgtaccatcacgtatgaacatcggtcagatccttgaaactcacttgggtatggct
gctaaaggtatcggtgataagatcaacgcgatgctgaaacagcaacaagaagttgctaag
ttacgtgaatttatccagaaagcttacgatctgggtatggcacctcgtcagaaagttgat
ctggacaccttcagcgatgaagaagtgttacgtctggctgaaaacctgaaaaaaggtatg
ccaaccgcaacaccagtgttcgatggtgcagaagaaatggaaattaaagagatgctaaaa
ttagctgatcttccaacttctggtcagattacacttttcgatggtcgtacaggtgaacaa
tttgagcgtccagtaactgttggttacatgtacatgctgaaactgaaccacttagttgat
gacaagatgcacgcccgttctaccggttcgtacagcttggttactcagcaacctcttggt
ggtaaagcacagtttggtggacagcgtttcggggagatggaagtgtgggcactggaagca
tacggtgcagcatatactcttcaagaaatgcttactgttaagtcggatgacgttaacggt
cgtaccaaaatgtacaaaaacatcgttgatggtaaccatcagatggaaccaggtatgcca
gagtcgttcaacgtattgttgaaagagatccgttcactgggtatcaacatcgaattggaa
gacgaataa
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