Proteus vulgaris: CRN77_07170
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Entry
CRN77_07170 CDS
T05486
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
pvg
Proteus vulgaris
Pathway
pvg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pvg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CRN77_07170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvg03021
]
CRN77_07170
Transcription machinery [BR:
pvg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CRN77_07170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sas-6-like_oligomerization
Cwf_Cwc_15
CDC45
BUD22
Motif
Other DBs
NCBI-ProteinID:
ATM99521
LinkDB
All DBs
Position
complement(1603298..1605154)
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AA seq
618 aa
AA seq
DB search
MEQNPQSQLKLLVTKGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLMLAENSNDTDDDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAGEARLSDLITAFIDPNAEEMAESED
VNLDKDDDEVDNSAEDEDEDEDEDGDNDSDSDDDNSIDPELARQKFTELREQYEKTRQTI
KAKGRNHKDTELEILLLSEIFKQFRLVPKQFDYLVNNMREMMDRVRAQERHIMRLCVDQV
KMPKKNFITLFTGNETNDTWFTAARAMNKPWSEKLAGIEEEVQRSLQKLQQIEVETGLTI
EQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKA
VDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMG
REPSPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSA
TSESLRSATHEVLAGLTLREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKAL
RKLRHPSRSEVLRSFLDE
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaagctacttgttactaaaggtaaggagcaaggc
tacctgacctatgctgaggtcaatgaccatctgccggaagatatcgtcgattcagatcaa
atcgaagacatcatccagatgattaacgacatgggcattcaggttatggaagaagcacct
gacgccgatgatctgatgctggcagaaaattcaaatgatactgatgatgatgctgcagaa
gccgcagctcaggtactttctagtgtagaatctgagattggccgtacaaccgaccctgtg
cgtatgtatatgcgtgaaatgggtacagttgaactgctcacccgggaaggtgaaattgat
atcgcaaaacgcattgaagatggtattaaccaagttcaatgttccgttgcagaatatcct
gaagcaattacttatcttcttgaacagtatgatcgcgttgaagctggcgaagcacgtctt
tcagacttgattactgcgtttattgaccctaatgccgaagaaatggcagaaagtgaagat
gtcaatttagacaaagatgatgatgaagttgacaacagcgctgaagacgaagatgaagac
gaagatgaagatggcgacaatgacagcgatagcgatgatgataacagcatcgatcctgaa
ttagcgcgtcagaaatttactgaacttcgtgagcaatacgaaaaaactcgccaaactatc
aaggcgaaaggtcgtaaccacaaagatacagagcttgaaatcttattgttatctgaaatt
ttcaaacagttccgtttagtaccaaaacagtttgattatctggttaacaatatgcgtgaa
atgatggacagagttcgtgctcaagaacgtcacatcatgcgtctttgtgttgatcaagtt
aagatgccaaagaaaaacttcattactttgtttacaggtaacgaaaccaatgacacatgg
ttcactgctgctcgtgcaatgaataagccttggtctgaaaaactggcaggtattgaagaa
gaagtacaacgcagtttacaaaagctgcaacaaattgaagttgaaactggactgacaatc
gaacaggttaaagatattaaccgtcgtatgtctatcggtgaagccaaagcacgtcgtgcg
aaaaaagagatggtcgaagcgaacttacgtctcgttatctctattgcgaaaaaatatacc
aaccgtggcctacagttccttgacctgatccaagaagggaatattggtctgatgaaagcg
gttgataaatttgaataccgtcgtggttataagttctcaacttatgcaacatggtggatc
cgtcaggcaattactcgttcaatcgctgatcaggcgcgtacaatccgtatccctgttcac
atgatcgaaacgattaataaactgaaccgtatctctcgtcaaatgttgcaagagatggga
cgtgagccttcaccagaagagcttgcagaacgtatgctgatgcctgaagacaagatccgt
aaggtactgaaaatcgctaaagaaccaatctccatggaaaccccaatcggtgacgatgaa
gattcacatttaggcgattttatcgaggatacgactctcgaattaccactggattctgca
acatcagaaagcttacgttcagcaactcacgaagtgttagcaggtttaacattacgtgaa
gcgaaagtcctgcgtatgcgtttcggtatcgatatgaataccgaccataccttggaagaa
gtgggtaaacagtttgatgttacccgtgaacgtattcgtcagattgaagcaaaggcactg
cgtaaattacgccacccaagccgttctgaagtattacgtagcttccttgacgagtaa
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