Chlorobium phaeovibrioides: Cvib_0060
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Entry
Cvib_0060 CDS
T00499
Name
(GenBank) DNA-binding protein Fis / transcriptional regulator, Fis family
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
pvi
Chlorobium phaeovibrioides
Brite
KEGG Orthology (KO) [BR:
pvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvi03000
]
Cvib_0060
Transcription factors [BR:
pvi03000
]
Prokaryotic type
Helix-turn-helix
Other families
Cvib_0060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
GAF_3
AAA_5
HTH_8
AAA
AAA_2
AAA_3
Mg_chelatase
AAA_16
MCM
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ABP36088
UniProt:
A4SC79
LinkDB
All DBs
Position
64681..66795
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AA seq
704 aa
AA seq
DB search
MTDPSLIESRRLTQYISDAVGSVRDPQELFHTLTDKLRLMFKFDSAVIVTIDKDRRYVSV
FFEMFLFPIAQGFANEKRLLAGSWFEPFLTKPAVATVSIGDELRRHGNDSYPILKIFYDA
GMRQIVLSPLLSGGEVIGFLNFVSRDEKAWSEAERDLLASVTSPISMAVSNALAYDELRQ
REAETAMQLAVNNALMTIRDRGQMLLAVCEQISKLLPVVYLGIRVFGDDGTPRLADNFMH
DEEGRFISVSTEERLSHTGDEDAMRESRELIAHPGVYSGDRFLQLARESRLVAEVQERYG
ICTIISAQLWDAPGSHAGLIISSSRRPFEEAELATLNLIIPQLSLALQNLLAFDEIDTLR
QRLEGERTYLKEEIRAVHNFEEIIGTSAPLAAVLRRVSQVAPTDATVLIQGETGTGKELF
ARAIHTLSPRNERVLVRVNCAALPATLIESELFGHEKGSFTGATGRRIGKFELADGGTIF
LDEIGELPLELQSKMLRVLQEREIERLGGGKLIPVNVRVIAASNRDLQKEVAAGRFRADL
FFRLNAFPIFLPPLRARTGDISMLALHFAQKFAREFGRPNRPIRERDMQELKERQWKGNI
RELAHAIEQAVILTDGPVLDFSTILTPRSRHLAALSPSPAKGIQSMAIFEEEVREMERTL
ILDALDQAKGRVSGKGGAAELLSIHPKTLYTRIEKLGLRKRYHT
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccctccctcattgagtcccgccggctgacccagtacatcagcgatgcagtc
ggaagcgtgcgcgacccgcaagagcttttccacacccttaccgacaagctcaggctgatg
ttcaagtttgattcagccgtcatcgtcaccattgataaagaccgccggtatgtcagcgtt
tttttcgagatgttcctcttccccatagctcaggggttcgcaaacgagaaacggctactt
gccggctcatggtttgagccatttctcacaaagccagccgtggcaaccgtcagcatcggc
gacgagctgcgccgccatggcaacgattcctatccgattctgaaaatcttctacgacgcc
gggatgcgccagattgtgctctctcccctcctttcgggaggcgaggtcatcgggttcctc
aactttgtatcgcgtgatgaaaaggcatggagtgaggcagaacgcgacctgcttgcttcc
gtcacctcccccatctccatggctgtgagcaacgcccttgcctatgacgaactccgtcaa
agggaggcagaaactgccatgcagcttgccgtcaacaacgccctgatgaccatccgcgac
cgcggccagatgcttcttgccgtctgcgagcagatcagcaagcttctgccggtcgtctat
ctcggcataagggtgtttggtgatgacggtaccccccgcctggcagacaacttcatgcat
gatgaggaggggcggttcatttcggtcagtacggaggagcgcctgagccacacaggagat
gaagatgccatgcgtgaaagccgcgagcttattgctcatccgggtgtatactccggcgac
agattccttcagcttgcccgtgagtcgcggcttgttgccgaagtacaggagcgctacgga
atctgtaccattatcagcgcacagctctgggacgcacccggaagccatgcgggccttatt
atctccagcagccggagaccctttgaagaggcggaactcgctaccctcaacctcatcatt
ccccagctctcccttgctctgcagaacctgctcgcctttgacgaaattgacactctccgc
cagaggctggagggggaacgcacctacctcaaggaagaaatccgcgccgttcataacttt
gaagaaatcattggcaccagcgccccccttgcagccgttctgaggcgggtcagccaggtg
gccccaaccgacgccaccgttctgattcaaggcgaaaccggtaccggcaaagagctgttc
gcccgtgccatccacaccctctccccccgcaatgaacgggttctcgttcgggtcaactgc
gccgcactccccgccaccctgattgaatcggaacttttcggtcacgaaaaaggcagcttc
acaggcgccactggccggcgtatcggtaaatttgaactcgccgacggtggcaccattttc
cttgatgaaatcggagagcttccccttgagctccagtcaaaaatgctccgggttctccag
gaacgcgaaatcgaacgcctcggaggcggcaagctcattcccgtcaatgtccgcgtcata
gccgcaagcaaccgcgacctgcagaaagaggtggcagccggacgattccgagccgacctc
ttcttccgccttaacgcattccccatcttcctccctccgctcagggccagaaccggcgac
atttccatgctcgccctccatttcgcccagaagttcgcccgcgaattcggccgtcccaac
cgccccattcgtgagcgcgacatgcaggaactcaaagaacgccaatggaaaggcaacatc
cgcgaacttgcccacgccatagaacaggcagtcatcctcactgacggccccgtgctcgac
ttctcaaccatcctcaccccccgcagccgccacctggcagctctcagccccagccccgca
aaggggatacagagcatggccatcttcgaagaagaggtccgtgaaatggaacgcaccctc
attctcgacgccctcgaccaggcaaaaggccgcgtcagcggcaaaggcggagccgcagaa
ctcctctccatccatcccaaaaccctctacacccgcatagaaaagcttggcctccgcaaa
cgctaccacacatga
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