Chlorobium phaeovibrioides: Cvib_0073
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Entry
Cvib_0073 CDS
T00499
Name
(GenBank) DEAD/DEAH box helicase domain protein
Organism
pvi
Chlorobium phaeovibrioides
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ABP36100
UniProt:
A4SC91
LinkDB
All DBs
Position
83847..89510
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AA seq
1887 aa
AA seq
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MKDLVGSYERLKLIYRMYIESAFPFKNEGMRDERRKLLDESALLAQEPLVEPSPQYLSSG
KTLSQVVAELDKEYDGLKDLGGPIMGGFELYEHQRESLLATLRDHQDIIVTTGTGSGKTE
CFLLPLLGELVKESRAWPESPNWPDRRDWWNDRPLAWRPQWAHSGRIATGSHAMRAMILY
PLNALVEDQLRRLRLALDSEDSHTWMDRACGGNRVLFGRYTGSAPVSGPMPDGNGRAPGV
KKLADLMKRAQHEDARVREAVHIDPQVRYHFPNLDGGEMWSRWDMQATPPDIMITNYSML
NIMLMRETEDMIFQQTRSWLASDTSHVFSLIVDELHSYRGTSGSEVAYILRLFLERIGLD
PDSPQLRIMATSASMDEGAGGNFLQEFFGRGRDRFRVISGGPPESPKAVPQNLSPHASLF
AGFSAQTHEAVLDGLAPVDQKVLDEASRAFLQQVGIDGQNQGLAPSMGIGMGKIGVVDAL
RNACSGDDGLPRATRLGLIDKRLFPDAQVPVGRAASDELRGLLLALSCATTPHGISALPL
RSHLFFHNLQNLWVCSNPACNHNGVEANGRNVGALHGYHRVNCSCGGKVLDLLVCSVCGE
VFLGGYKYGMEGGHGRRYLTSDMPAIEKMPDAATARLVHGEYAIFYPKKGNPIGARGRND
GTRYEWRRGGQTVRCGWRNAWLEVYTGSLADYATQEGQEVEGWLYTVDNPESQALPPVCP
SCGTDQRKASSFPTPLRSHRTGFQRASQVLASTLVREIGPVGDAAKGKLVLFSDSRQDAA
KLSAGMELDHYRDMVRVAMIDAHSDFITQFAATLRYWINIHNRRSGEFRSLVNGLNDGFP
LEEDTTSIATDDEELAYMFRDMHSSYYDALMDMAAGASGRVDPETQSDIRWIIGQYPHEV
PFRSLCDAIFVRLASVGICPGGPRYEYSRYPRERMDHEWWECFSWDVPGRIRENATPEQR
EHILKLKDSLLRELTLTLFSNSVRTFESLGLGYATFRPVGEPDDKLVQCTNAIIRNTCLK
RNFHLWPYFQRDGGELELWPRHIPYCDLSGVEPNEVLRQLRESCVGLRGEHANLGIDPEH
LWLHLSDQDLSPRSGFKCLKCGAYYMNYAGGYCIDCINEPLVQAPLDAHMDYYRYLTGAS
GGAFRLHCEELTGQTDMSDKSSRQRWFQGIFLDGEAKEPQGIDILSVTTTMEAGVDIGSL
VAVEMANMPPRRFNYQQRVGRAGRRGAPLSIALTFCRGRSHDDFYYQRPEEITGDPSPAP
YLDMTRKEIVKRVVAKEVLRRAFSASFPEGIPDVAGENGRERIRESVHGAFGTVGGWRDA
RKHIAEYLAAMQVKDINGIAGCLSKGTEFHDDSFFYEWLNGYVKETLIAEIDRVVGGAIG
QLPLSELLASKGLLPMFGFPTNTRLMFTERPMRGNPWPPEHGTVDRQLDIAISQFAPGSE
TVKDKRVHKAFGVVDFVPAGNVVSIRSGFRPSIVEGNEKFARCSNCMAVLPRTEPEGAIP
AGEMLEEEECPICGANSLRLVDARVPTGFISDFDPKAFEGSFEFTPYASRPSIYIDQIEL
NEVPGTNIKTAGDSIDLASVNDNGGKGGFDFIEYNIPRMNGQGAFRVKNISQDEVEGGYR
IALLSKKTTDVFLMDIQHWPVGVFADPREIEGRAAWFSFSFMLRVAAAKQLDIDQQELSA
GFRTVMGENGWPTAQGFLSDALENGAGYCRWIGEEANIKQVLRLCDPTAESSIGTHWLAS
GHAEVCDTSCNRCLREYYNLPYHGLLDWRLALDMVRMAVDPAATIDLHSPWAVNANPWKN
VFYGDDCLAGKILSEFGFIRDEASSSLPLFVSQGRGKILLPSHPLWDINSNQSYLAARAE
AIEKYGINNVSPVNPFRLLRRPVDLLH
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcttgttggctcatatgagcgtctcaagctcatttatcgcatgtatatcgaa
agtgcttttccttttaagaatgaaggaatgcgcgatgagcggaggaaattgctagatgaa
agtgctttgcttgctcaggagccattggttgagccgagtccccagtatctctcatccggg
aaaacattaagccaagttgtcgcggagttggacaaggaatacgatgggttgaaggatctt
ggcgggcccattatggggggcttcgagctttatgaacatcagcgggaaagtcttctggcc
actcttagggaccaccaagatattattgtgacgaccggcaccggttctggcaagacggag
tgttttttgctcccgttgctcggtgagctggtaaaggagtccagagcatggcctgaaagt
cccaattggccggatcgccgtgattggtggaatgatcggccattggcatggcgcccacag
tgggctcattctggtaggattgcgactggatcacatgctatgcgtgcgatgattctatat
ccgttgaatgctttggtcgaagaccagttgcgtcgcttgcgtttggctctcgattccgaa
gactcacatacttggatggatagggcttgtggaggaaatagggtgctttttggccggtac
actgggagcgcacccgtttctgggccgatgccagacggaaatggtcgggctcccggggtc
aagaaacttgccgatttaatgaaaagggcacaacatgaagatgcccgcgtgagggaggct
gtacatatcgatcctcaggtgcgctaccactttccgaaccttgatggtggtgagatgtgg
tcgcggtgggatatgcaggcaacccctcccgatatcatgatcacgaactactcgatgctc
aacatcatgcttatgcgtgagaccgaggatatgatattccagcagacccggtcatggttg
gcgtcggatacttcgcatgtcttttccctgattgttgatgaacttcattcataccgcggc
acatcaggctccgaagtggcttatatccttcgtttgttccttgagcgaatcgggttggat
cccgattcgccacaattaaggatcatggcaacatcggctagtatggatgaaggggcgggt
ggcaacttcctgcaggagttcttcgggaggggtagggatcggttccgggttatatcaggg
ggccctcctgaatcgcctaaggctgttccgcaaaacctatcaccgcacgcaagccttttc
gcaggattttctgcgcagacgcatgaagctgttctggatgggcttgctcctgttgaccaa
aaagttctggatgaggcgtctcgagcctttttacagcaagtcggtattgatggacaaaat
cagggccttgccccctcaatgggtataggcatggggaaaataggggttgtcgatgccctt
cggaacgcatgctcgggtgatgatgggcttcctagggcgacccgcttggggcttatcgac
aaacggctcttccctgatgcacaagttcctgttggcagggcggcatccgatgaactgcgg
ggcttgttgctcgccttatcctgtgccactaccccgcatggcatatcggcacttcccttg
aggagccatttgttcttccacaacctgcaaaatctctgggtctgctctaatcctgcttgt
aaccataatggtgttgaggcgaacgggcgcaatgtcggtgcattgcatggctatcatcgg
gttaattgctcatgtgggggcaaggtccttgacttgctagtttgttctgtgtgcggcgag
gtgtttctgggcggatacaaatatgggatggaaggtggtcatggaagaaggtatttgact
tccgacatgccggcaatagagaaaatgccagatgcggctactgcacggttagtccatggg
gagtacgcaatattttacccgaaaaaaggcaatccaataggggcaagggggcgcaatgac
gggactaggtatgaatggagacggggcggtcaaactgttcgttgtggatggcgaaacgcg
tggctagaggtctataccggatcattagccgattatgcgacccaagaaggtcaagaagtt
gaggggtggctgtacaccgttgacaatccggaatcgcaagctttaccgccggtttgcccg
agttgcggtacagaccaacgaaaggcatcaagctttccgacaccattgcggtcacataga
actggtttccaaagggcgagccaagtgttggcctcgacgcttgtccgcgaaatcggccct
gttggcgatgctgcaaaaggtaagttggtgcttttctcagacagtcggcaggatgccgca
aaactatctgccggcatggaactcgaccattatcgtgatatggtccgtgttgcgatgatt
gatgcgcatagtgattttattacacagttcgcagcgacattgaggtattggatcaatatc
cataatcggcgatctggggagttcaggagtttggtcaatggcttgaatgatggattccca
ttagaagaggacacgaccagtatagcaacagatgacgaagaactcgcatatatgttccga
gatatgcacagcagctactatgacgcccttatggatatggctgccggagcatctgggcga
gttgatcctgaaacgcaatctgacataaggtggataatagggcagtatccgcatgaagtc
ccgttccgttcgctgtgcgacgccatttttgtccgcttggccagtgttggcatatgtccg
ggggggccccgttatgaatattcacggtatccgagggagaggatggaccacgaatggtgg
gaatgctttagctgggatgtcccggggagaatccgtgaaaacgcaacccctgaacagcgt
gagcatatactgaagttgaaagattctttgttgcgtgaacttaccctgaccctcttctcg
aactcggtcagaaccttcgaaagccttggacttggctatgcgactttcaggccggttggt
gaaccggacgataaattagtgcaatgcacaaatgcgatcattcggaatacttgcctgaaa
agaaactttcatctttggccctatttccagagggatggcggcgaactggaattatggccg
cgacatattccatattgcgacttgagtggtgtcgagccgaatgaagtcctccggcaactt
cgggagagctgtgtcggcttgcgtggcgagcatgccaaccttggtattgatcctgaacat
ctttggcttcatttatcagaccaagatctttctccaagaagtggcttcaaatgccttaaa
tgcggcgcctattatatgaattatgctggtggatattgcatcgattgcataaatgagccg
cttgttcaggctccgttggatgcgcatatggattattaccgatatctcacaggtgcttcc
ggtggtgcattccggctccattgcgaagagctcacagggcagacggacatgtcagataag
agtagtcggcagcggtggttccaaggtatttttttggacggagaagccaaggaaccacag
ggaatcgatattctcagcgttacaacgacgatggaggctggtgtcgatatcggctctctc
gtggcggttgaaatggcaaatatgcctccacggcgcttcaattaccagcaaagagtgggg
cgcgccggtcgaagaggtgcgccgttgtccatcgcattgacattttgccgcggcaggagc
catgacgatttctattaccagcgaccggaagagattaccggcgatccttctccagcgccc
tatctcgacatgactaggaaagaaattgtcaagagggtcgtggctaaggaggttcttcgc
agggctttcagtgcatcattccccgaagggattcctgatgtggcaggggaaaatggtcgc
gaacgcatccgggaaagtgtccatggcgcatttgggacagttggcggatggcgtgacgca
aggaaacatattgccgaatacttagctgcaatgcaagtcaaggatatcaatggcatcgca
ggttgtctctcaaaagggacggaatttcatgatgattcgtttttttacgaatggctgaat
gggtatgtcaaagaaacgcttatagcagaaatcgacagggtggttggaggtgcgatagga
caacttcctctatccgaactgctggcctctaaaggtttactccctatgttcggtttcccg
acaaatacgcgcctaatgtttactgaaaggcctatgcgaggcaatccatggcctccggaa
cacggcaccgtagatcggcagcttgatattgccatcagccaatttgcgcctggttcggaa
acggtgaaggataagcgggttcacaaggcgtttggcgttgtggattttgtcccagccggc
aatgtggttagtatccgatccggtttcaggccttcaattgtcgagggtaacgagaaattc
gcaaggtgctctaattgtatggcggttttgccaagaaccgagccggaaggagcaattccc
gctggggaaatgttggaagaagaggaatgcccaatatgcggagccaactcattgcgatta
gtggatgctcgggtgccgactggtttcataagcgactttgatccaaaggcattcgagggc
tcattcgaattcacgccatatgcaagcaggccgtccatttacatcgatcaaatcgaatta
aacgaagtgccgggaacaaacataaagacggcaggggattcgatcgatctggcttctgtt
aacgataacggaggaaaaggtgggtttgacttcatcgaatacaatattcctcgaatgaat
ggccaaggagcattcagggtcaaaaacattagtcaggacgaggtcgagggcggttatcgg
atagccctcttgtcgaagaagactactgacgtcttccttatggatatccagcattggcct
gttggtgtcttcgccgatcccagagaaattgaaggaagggcggcatggttctcgttttca
tttatgctccgggttgccgcggcgaaacagcttgacatagaccaacaagagctgtcagcc
ggattcaggactgtcatgggcgagaatggatggccaacagcccaagggttcctcagcgat
gctttggaaaacggggcgggatactgccgctggattggagaagaggcgaacataaaacaa
gtccttcgcttatgtgatcccaccgcagaatcatcaataggtacccattggctggcgtct
ggccacgctgaagtgtgcgatacttcctgtaataggtgcctacgtgaatattacaacctt
ccctatcatgggctgctagattggcgtctggctctcgatatggttcgtatggctgtggac
ccggcagccacaatagatctccatagcccatgggcagtaaacgcaaacccttggaagaat
gtgttttatggagatgattgcttggcagggaagatcctttctgaattcgggttcatccgt
gacgaagcctcaagcagtttgcctttgttcgtttctcagggaagaggcaagatcttattg
ccttcacacccattatgggatatcaactcaaaccaatcctaccttgcggctagggcagag
gctattgaaaaatatggtataaacaatgtctccccagtcaaccccttccgccttctcagg
aggccggttgacttattgcattag
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