KEGG   Chlorobium phaeovibrioides: Cvib_0105
Entry
Cvib_0105         CDS       T00499                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K10754  replication factor C subunit 1
Organism
pvi  Chlorobium phaeovibrioides
Pathway
pvi03030  DNA replication
pvi03410  Base excision repair
pvi03420  Nucleotide excision repair
pvi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Cvib_0105
   03410 Base excision repair
    Cvib_0105
   03420 Nucleotide excision repair
    Cvib_0105
   03430 Mismatch repair
    Cvib_0105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvi03032]
    Cvib_0105
   03400 DNA repair and recombination proteins [BR:pvi03400]
    Cvib_0105
DNA replication proteins [BR:pvi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    Cvib_0105
DNA repair and recombination proteins [BR:pvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     Cvib_0105
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 DNA_ligase_ZBD BRCT HHH PTCB-BRCT BRCT_2 Auto_anti-p27
Other DBs
NCBI-ProteinID: ABP36129
UniProt: A4SCC0
LinkDB
Position
complement(126768..128234)
AA seq 488 aa
MRKEDFTALNDTRPEEDRFANPRNATAGTLKLQDSAEVAVRRLWFVAYYLDGIQDPDTPH
FHRLQLLETAGFFTGGHYRLCKGMQEIAAFIARWNEERWHLPYETDGVVLKLNDVRQWKT
LGATSKSPRWAIAYKYPAQQATTVLRDVVFQVGRLGTITPVAELEPVRLAGSTVSRSTLH
NFDEMRRLGIMIGDRVVIEKSGEVIPKVIRVVTEARPVDARLVELPSRCPACSTPIVREE
GEVGFYCPNEAGCPAQLKGRILHFASRNAMDIQNLGEALVEQLVAFGLVHDPGDLYFLQE
PQLRNLERMGPKSAQNVVRALDESRSQSYARLLFALGIRHVGQATARELARAFPSIEALE
AASEEELADVADIGPVIARSIREWFEAPAVSALLEKLRDARLPLAAEDPKPLINSNFEGL
SVVFTGALLRHDRQSASELVLERGGKIVSTVSKKTGLVVAGREAGSKLEKALKLGLRVIS
EEEFEAML
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgcggaaggaggatttcacggcgctgaacgatacccgtcccgaagaggaccggttcgcc
aatccccggaacgccacggccggaaccctcaagctgcaggattcggctgaagttgcggtg
cgccggctctggttcgtcgcctactacctcgacgggatccaggatcccgacaccccccac
ttccatcgactacagctgcttgaaacagcgggcttcttcaccggcggccactaccggctc
tgcaagggtatgcaggaaatcgccgcattcatcgcccgttggaacgaggagcgctggcac
cttccctacgagaccgacggcgttgtattgaagctgaacgacgtgaggcagtggaagacc
ctcggtgcgacgagcaagagcccccgctgggcaatcgcctacaagtacccagcccagcag
gccacgaccgtgcttcgtgacgtggtcttccaggtgggccggctcggtaccatcacgccg
gttgcggaacttgagccggtacggcttgcgggctcgaccgtgtcgcgttctaccctgcac
aacttcgacgagatgcggcgccttggcataatgattggcgaccgggttgtcatcgagaag
tccggcgaggtgatcccgaaggtgatccgtgtcgtcactgaggcgcgtcccgtcgacgcc
cgtttggttgagctgccctctcgctgccctgcgtgcagcacgccgatcgtccgggaggag
ggggaggtcggtttttactgcccgaatgaagcgggttgcccggcgcagctgaaaggccgg
atcctgcacttcgcatcccgcaacgccatggacatccagaacctcggcgaggcgcttgtc
gagcagctggttgcattcggcctcgtgcatgatcctggcgacctgtacttcctgcaggaa
ccgcagctccggaaccttgagcgcatgggaccgaaatctgcacagaatgtggtaagggcg
ctcgatgaaagccgcagccagagctacgcacgcctgcttttcgcactcggtatacgccac
gtcggccaggctacggcacgtgagctcgcacgtgcatttccctcaattgaagcgcttgag
gccgcctccgaggaggaacttgccgatgtggccgacatcggcccggtgattgcccggagc
atcagggagtggtttgaagcgcctgccgttagcgcgctccttgaaaaactccgtgatgcc
cgccttccgcttgcagccgaagatccgaagccgctcataaacagcaatttcgaggggctc
agtgtcgtctttaccggtgcgctcctgcgccacgaccgccagagtgcatccgagctggtg
ctggagcggggtggaaagatcgtttctacggtcagcaaaaagacggggctcgttgtggcg
ggcagagaggctggcagcaagctggaaaaggccctcaagctgggactcagggtcatcagt
gaggaagagttcgaagcaatgctgtga

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