Chlorobium phaeovibrioides: Cvib_0380
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Entry
Cvib_0380 CDS
T00499
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pvi
Chlorobium phaeovibrioides
Brite
KEGG Orthology (KO) [BR:
pvi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvi01002
]
Cvib_0380
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pvi01011
]
Cvib_0380
Peptidases and inhibitors [BR:
pvi01002
]
Cysteine peptidases
Family C82
Cvib_0380
Peptidoglycan biosynthesis and degradation proteins [BR:
pvi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Cvib_0380
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
ABP36402
UniProt:
A4SD43
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All DBs
Position
386981..388633
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AA seq
550 aa
AA seq
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MVLFLLFFLAFSPAAPRGAEPSATIVKEDSVAAFMQERFACLLGLEGASGRKDRRTATEQ
LALWYAARGYRPVWTSPALRSGLLSAVNSAVDDGLLPSDYHCTDIEHYLKHPPRGTGEQA
RCDILLTDAMLSLATHLRYGKVDPERLDPNWNLTDPKRLAELQLQLQKALASGSILTALQ
KMRPEYFKYGLEREALARYRQIEQAGGWPVVPGGQAIRPGQSDPRVPLIRRRLSVTGDFE
GRGKESSVVLDSELAAAIRNFQKRHALQADGVAGGATLAAMNVTARERVQQLRVNLERYR
WFVGQLEPTFVLVNIAGFSLQYVHEGSLRWSTRVIVGQPYRKTPVFKADMYSVLFNPRWV
VPPTILAEDALPAIRQDPGYLSRKQLQVIDGKGSPVDPSSINWNAFGAAAFPYRLQQKAG
DHGALGRIKFVMPNRHIVYLHDTPTKDLFEKSSRTFSSGCIRVENPARLAELVLDDSLKW
NGGAIRSAIATGKTHSEPLPRRIPVFILYLTAVAERDEVFFLEDIYDRDGAVLKALNAPT
QKLTMESCGF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggttctctttcttctctttttcctggcattcagccctgcggctccccgcggggctgag
ccgtcggcgaccatcgtcaaagaggattcggtggctgctttcatgcaggagcggtttgcc
tgtctcctgggtctggagggtgcttccggccggaaagatcgacgcactgccacagagcag
cttgccctttggtatgcggcacggggataccgcccggtctggaccagtccggctcttcgt
tccgggcttctctctgcggtgaacagtgctgttgatgatggtctgctgccctccgactac
cattgcaccgatatagagcattatttgaagcatccgccccgcggcaccggtgaacaggct
cgttgtgatattctgttgactgatgcgatgctttccctggcaacccatctgcgatacggg
aaggttgatcccgagcggctagacccaaactggaatttgacggatccgaaacgccttgct
gaactgcagcttcagctgcaaaaggcattggcgtccggcagcatccttacggccctgcaa
aagatgcggcctgagtatttcaagtacgggctggaaagagaggcgcttgcccgttaccgc
cagatagagcaggctggagggtggcctgtggtcccgggcgggcaggcgatcaggccggga
caaagtgatccccgtgttcctcttattcggaggcgcctcagtgtgaccggcgatttcgag
ggaaggggcaaagagtcctccgtagttcttgacagtgagcttgcagcagcaatccggaat
tttcagaagcgccacgctcttcaagcggacggtgtggcgggcggtgccacgcttgcagcc
atgaatgtgactgcccgcgaaagggttcagcagctcagggtcaatcttgagcggtacaga
tggtttgtcgggcagcttgagccgaccttcgttctggtcaatatcgccggtttcagcctc
cagtatgttcatgagggttcgttgcgctggagcacgcgggtgattgttggtcaaccctat
cgcaagaccccggtgttcaaggccgacatgtactctgttctcttcaacccccgatgggtt
gttcctcctaccattcttgccgaagacgcactgccggccatccggcaagatccgggatat
ctcagccgcaagcagttgcaggtcatcgatggcaaggggagccccgtcgacccgtcttca
atcaactggaatgccttcggtgccgctgctttcccctatcggctgcagcagaaagccgga
gatcatggcgctttggggcggatcaagtttgttatgccgaaccgccatatcgtctatctt
catgatacaccgacgaaagatctttttgagaaaagcagcagaaccttcagttccgggtgc
atccgtgttgaaaatccggcacgccttgccgaacttgtgcttgacgacagcctgaagtgg
aacgggggtgcgatacgcagcgccatagcgacgggtaagacgcatagcgagccgcttccc
cggcgcattcccgtgtttattctctatcttacagctgttgcggagcgagatgaggttttt
tttcttgaggatatctatgatcgtgacggggccgtgctgaaggccctgaatgcgcccacc
caaaaactgacaatggagagctgcggcttttaa
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