Chlorobium phaeovibrioides: Cvib_0854
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Entry
Cvib_0854 CDS
T00499
Name
(GenBank) 8-oxoguanine DNA glycosylase domain protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
pvi
Chlorobium phaeovibrioides
Pathway
pvi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cvib_0854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvi03400
]
Cvib_0854
Enzymes [BR:
pvi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Cvib_0854
DNA repair and recombination proteins [BR:
pvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cvib_0854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
Ogg-HhH
HhH-GPD
HHH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ABP36869
UniProt:
A4SEG0
LinkDB
All DBs
Position
complement(960029..960970)
Genome browser
AA seq
313 aa
AA seq
DB search
MSYQPIETNKNRLILVKETLFSGQSFMWNESDHECGIYSSVIDGSPVLIKQDNPYSLSVS
VEKNELFGIPVQSFFEHYFSLDIATNSLFDDEFAARYPDLAFRLLKLQGLRVLRQDPYET
LVTFMCAQGIGMSIIRRQVNMLCRYFGNEVRVADGGRDTPLYSFPAPSVLADADPALLRR
CCNNNSMRAGNIGEASRLLALGRLDLQALSDPSLPLSEIRTELTALKGIGFKIADCIALF
GLGRFDAFPIDTHVEQFLSSWFSIGAHQKGLSQKRYLHLQEKAVELLGESLSGYAGHHLF
HCWRTTEKNMKAF
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaacctattgaaacaaacaaaaaccgactgattcttgtaaaggaaactctg
tttagtggtcagtctttcatgtggaatgaatcggatcatgaatgcggtatatattcttct
gttatagacgggtcacctgtgttgataaaacaggataacccatattcattatcggtttct
gttgaaaagaatgagctcttcgggattcctgtccagagctttttcgagcactatttttca
ctcgatatagcaaccaactctctttttgatgacgagttcgctgcccggtatcccgacctt
gccttcagacttctcaaacttcaggggttgagggtactccggcaggatccgtatgaaact
cttgtcactttcatgtgcgcccagggaataggcatgtcaataattcggcggcaggtcaac
atgctgtgccggtatttcggaaatgaggtaagagtggccgacggtgggcgtgatactccc
ctgtactctttccctgctccgtctgttcttgcggatgccgaccctgcgttgctcaggaga
tgctgcaacaataattctatgcgtgcaggcaatataggcgaggcatcccgtcttctcgcg
ctgggcagactggatctccaggcgctctccgacccatcactgccattaagcgaaatccgt
actgagctcactgcgcttaaaggcattggatttaaaattgcagactgtatagcgcttttc
gggctgggtcgctttgatgctttcccgatagacactcatgtggagcagtttctctcgtca
tggttttcaatcggcgctcatcagaaagggttgagtcagaagaggtatcttcatctacag
gaaaaagccgtggaactgcttggtgaaagcctttcgggatatgcgggccatcaccttttt
cactgttggcggactacggagaagaacatgaaagctttttga
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