Chlorobium phaeovibrioides: Cvib_0915
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Entry
Cvib_0915 CDS
T00499
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pvi
Chlorobium phaeovibrioides
Pathway
pvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cvib_0915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvi03400
]
Cvib_0915
Enzymes [BR:
pvi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Cvib_0915
DNA repair and recombination proteins [BR:
pvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cvib_0915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABP36929
UniProt:
A4SEM0
LinkDB
All DBs
Position
complement(1030449..1033673)
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AA seq
1074 aa
AA seq
DB search
MSLTLYTGNRSERLVSELAGRLSGRRLSSPLTEEIIVVQSRGMQRWLSIELAEKNGIWAN
SRFPLPDTLVRECFRIFFSEVDTSRYFGVQQMTWNIMTILPPLLDEPPFAAIRSYLSFDG
EGLRLYQLAERAAAIFNEYQFYRPDLLQRWESGGEEKGEGLWQSILWKSLVAGSGGVQPL
WALKDEFCRGLKLPMSGFPERISLFGISYLPKFHLDILSALSRVTDITLFVLSPTSDFWA
DIMARKTQARLSVEERIYRNEGNPLLASLGHMGREFSSLMQDLADSAEMQLEAYEEPGEE
TLLRSLQTDMLHLQGAGADAAPRPLPPNDSSVQIHSCHSPLREVEVLHDSLLSFFETYRD
LEPRDVLVLTPDIETYSPYISAVFGAGNHGETRIPFTVADRSMMNEGDIASAIAALLDLA
TSRLGAAEVFDLLSRLPVRRRFALDDDAQECIRRWIEKTGIRWGLDETDRLNAGVPSYRQ
NSWRAGLDRLLLGYAMPDEGSLYGGILPYDDIDASFAETLGIFASFVDALERLSERLNEP
ETLQEWRLVFLGMLDDFIVADADSEREYSEMLAIADTLGELFNETLHKEPVSPEVFTSWV
RSKLEERRQNLGFMTGGVTFCAMLPMRSIPFRVICLLGMNDAAFPRQHHAPSFDLVSSNP
RPGDRSLRNEDRYLFLEMMLSARDLLYISYVGQSVRDNSSLSPSVLVVELLDAIERVFSL
SDGSSIADRLTVRHRLQAFSPAYFDSAGPLFSYSEDNFHALSSRTYGGGERPPFVDEPLG
VPGDETCVVSLDELIRFYGNPAAFFLESTLAIRQNRLMTPLIDREPFSIEGLDAYMIREE
LLEKILQGSDPSDILPLFQARGIIPPSGIGERLFASMATESAAFAARLTALTEGAAELPP
LPVNLDIGGFRLTGELTHIWPKHQLSYRHASMRGRERIQSWIRHLVLNAAREEGYPTETI
LVMRNESLSFAQPDQPVLYLENLLKRYREGLHSPLLFFPEASLAYTRKLDDGLQKAYAEA
LAVWNDNPFSGLHGEGSHPAVQRCFGNTEPFGTEFKSLALELLLPLMNFQETRS
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttactctgtatacaggcaatcgttccgagcgtcttgtcagcgaacttgccggc
cggctttcggggcgcaggctctcatccccgttgacagaagagattattgtggtccagagc
cgcggcatgcagcgctggctttccatcgagctggcagagaagaacggcatctgggccaac
agccggtttcctcttcctgataccctggtgcgtgaatgtttcaggatttttttctctgaa
gttgacacttcgcgctactttggggtgcagcagatgacatggaatatcatgaccatcctt
ccgccgcttcttgatgaacccccttttgccgccatcaggagctatctttcatttgatggc
gagggcctcaggctctatcagctggctgaaagagcagctgcgatttttaatgagtatcag
ttttaccggcccgatctgcttcagcgctgggagtcgggtggtgaggagaagggtgaaggg
ttatggcagtcgattctctggaagagtcttgttgccggttcagggggcgttcaacctctc
tgggcgctcaaggatgagttctgcaggggactgaaactccccatgagcggttttcccgaa
cggatctctctcttcggcatctcctaccttccgaagtttcatcttgacatactttccgct
ctttcgcgcgttaccgacatcactctgtttgttctcagtcccacaagcgatttctgggcc
gacattatggctcggaaaactcaggcgcgtctttcagtcgaagagcgcatctaccgcaat
gaaggcaacccgctgcttgcctctctggggcacatggggcgcgaattttcctcgctcatg
caggaccttgccgattccgctgaaatgcagcttgaggcttatgaggaaccgggagaggag
acccttcttcgatcacttcagacagatatgcttcatctgcagggtgcaggtgctgacgcg
gcgccgcggcccctccctcccaatgattcttctgtacagattcactcctgccacagtccc
cttcgtgaagttgaggttctgcatgacagcctcctcagtttttttgagacttatcgggat
cttgagccgcgcgatgttcttgtgctcactcccgatattgagacttactccccatatatt
tccgcagtttttggtgcaggaaatcatggcgagacccgcatcccttttactgttgccgac
cggagcatgatgaatgagggggatattgcttcagctattgctgcgcttcttgatcttgca
acaagccggctgggcgcggctgaggtttttgatttactgtccaggttgcccgtaaggcgc
cggttcgctcttgatgatgatgcgcaggaatgcatcaggcgctggattgaaaaaaccgga
atccgatggggactggatgaaactgaccgattgaatgcgggagttccatcctatcggcag
aactcatggcgggcaggtcttgacaggcttctgcttggctatgccatgccggatgagggg
agtctctatggcggcattctgccctatgacgatattgacgcctcctttgcagagactctc
gggatttttgcttcgtttgttgatgcgcttgagcgactgtctgaaaggctgaatgaaccg
gaaacgcttcaggagtggcggctggtatttcttggtatgctggatgacttcattgtggca
gatgctgattccgaaagggaatacagcgagatgcttgccattgccgacactcttggagag
ctcttcaatgagacgctgcacaaggaacctgtatctccggaagtctttacttcatgggtc
cggagcaagctggaagagagaaggcagaatctgggattcatgaccggtggagttaccttc
tgcgccatgcttcccatgcggagcattccgttcagggtgatctgtcttctgggaatgaat
gatgcggcttttccccggcagcaccatgccccgtcgtttgatcttgtttccagcaatccc
cgccccggagaccgttctcttcgcaatgaagacagatatctctttctggaaatgatgctc
tctgcccgcgaccttctctatatcagttatgtcggccagagtgtccgcgacaactcgtct
ctttctccctccgttctggttgttgagcttcttgatgccattgaacgggtgttctctctt
tccgacggctcttcaattgcagaccgcctgacggtgcgccaccgtcttcaggccttcagc
cctgcttattttgactctgcaggtcctctcttcagttactcggaagacaattttcatgcg
ctttccagcagaacttatggtgggggagaacggcccccttttgttgatgaaccgcttggg
gtgccgggcgacgagacctgcgtcgtcagtctggatgaactgataaggttttacgggaac
ccggcggccttttttcttgagtccacactcgccatccgccagaaccggctcatgacacct
ctcattgaccgcgaaccgttcagtattgaggggctggacgcatatatgattcgagaggaa
ctgcttgagaaaattctgcaggggagcgatccttccgatatactccccctgtttcaggct
agagggattattcctccctcgggcatcggggagcggctctttgcctccatggcaaccgag
tcagccgcctttgccgcacgacttacagcattgacagagggagcggccgagcttcccccg
ctgccggtcaatcttgatattgggggattccgcctgactggcgagcttacacatatctgg
ccgaagcatcagctttcctatcgtcatgcatcaatgagagggcgtgagagaatacaaagc
tggatacgccatcttgttctcaatgccgcccgggaggaggggtatccaactgaaaccatt
ctggttatgcgcaatgaatcactcagcttcgctcagcctgaccagccggttctctatctt
gaaaatcttctcaaacgctacagggaaggtcttcactcgccacttctgttttttccggaa
gcttcgcttgcctacacccggaagcttgatgatggcctccagaaggcctatgctgaagcc
cttgccgtctggaacgacaaccccttcagcggacttcatggagagggttcgcaccctgca
gttcagcgatgtttcggcaatacagagccttttggtacagagttcaagagtcttgcgctt
gagcttctgctgccacttatgaactttcaggaaacgaggagttga
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