Chlorobium phaeovibrioides: Cvib_0961
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Entry
Cvib_0961 CDS
T00499
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
pvi
Chlorobium phaeovibrioides
Pathway
pvi02020
Two-component system
pvi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pvi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cvib_0961
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Cvib_0961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvi03021
]
Cvib_0961
Transcription machinery [BR:
pvi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cvib_0961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_21
Motif
Other DBs
NCBI-ProteinID:
ABP36975
UniProt:
A4SER6
LinkDB
All DBs
Position
complement(1082643..1083986)
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AA seq
447 aa
AA seq
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MAEFRLQQKQKAQLSTQQIISSQLLQLPLANLEQRIYEELQENPLLEAVEAEKENSLDER
ERSSASSGGQSSGEHFFQAVQFDSFHEILLKQLALQENIERGEVEVAIEILGNLDSDGYF
VEDPEVIVDSLRIAGLEVDGDEVEAIRLKILHLDPPGVAALDLRERLLVQLHSSRGKASV
RVRGVAEAILIHHFDDFIHRRFERLVKKLPHQPEEIDAAINAIVALDPHPGIFQDEGGHY
ISPDFLVSFDNGELTASLNDRSALSVKVSDRYRDILGKRQGSKEDLQFIRRNMQRANDFA
SALESRRQTLLKVIESLMKHQYAFFADGPAFLAPLGMKTIAADTGLDISTISRAANSKYV
QTRFGVFELKYFFTGAIQTDDGEDVSSKVIKQHLADMIEAEEPSKPLSDDRLTAMLSEQG
FQIARRTVAKYREQMQIPVARLRKKIF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcaggttgcagcagaagcagaaagcacagctttcaacacagcagataatc
agcagtcagctgctgcagcttccgcttgccaatcttgaacagcggatctacgaagagctg
caggaaaaccccctccttgaggcggttgaggcggagaaagagaattcgctggacgaacgg
gagcgaagttccgcttcatcaggcggccaaagctcaggtgaacatttttttcaggctgtt
cagtttgacagcttccacgaaattcttctcaagcagttggcgctccaggaaaacatagag
cggggtgaggtggaagtggccattgaaattctcggcaatctggactcagatggttacttc
gttgaagatccggaggtgattgttgacagtctccgcattgccggactggaagttgacgga
gatgaagttgaagccatccgcctcaaaatcctccatctcgatccgcccggtgtggcggcg
cttgatctcagggagcgactgcttgtgcagctgcattcctcgcgaggaaaagcctcggtg
agggttcgtggcgttgccgaagcgattctcatccaccattttgatgatttcattcatcgt
cgatttgagcggcttgtcaaaaaactcccccatcagccagaagagattgatgcggcaatc
aacgccattgttgcgcttgatccccaccctggtatttttcaggatgaaggcgggcattat
atttcgccggactttcttgtttcctttgacaatggggaactgacggcctctctcaatgac
cggagcgccctgtcagtcaaagtcagtgaccggtatcgcgacattctcggcaagcggcag
ggctcgaaggaggacctgcagttcatccgccggaacatgcagcgcgccaatgattttgcc
agtgctcttgagtcacggcgccagacgcttctcaaggtgattgagtcgctcatgaagcac
cagtatgcattttttgccgatggtccggcgtttcttgcgcctctcggcatgaaaaccatt
gcggccgataccgggcttgatatttccaccatcagccgtgccgccaacagtaaatatgtg
cagacgcggttcggagtttttgaactgaagtatttttttaccggtgcaatccagaccgat
gatggggaggatgtgtcaagcaaggtgatcaagcagcatcttgccgacatgatagaggcg
gaggagccgtcgaagccgctttcagacgaccgcttgacggcaatgctttcggaacagggg
ttccagatagccagaagaacggttgcaaaataccgtgaacaaatgcaaattccagtggca
agactaaggaaaaaaatattttaa
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