Chlorobium phaeovibrioides: Cvib_1133
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Entry
Cvib_1133 CDS
T00499
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pvi
Chlorobium phaeovibrioides
Brite
KEGG Orthology (KO) [BR:
pvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvi03400
]
Cvib_1133
DNA repair and recombination proteins [BR:
pvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cvib_1133
Archaeal homologous recombinant proteins
Cvib_1133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ABP37147
UniProt:
A4SF88
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All DBs
Position
complement(1279469..1280707)
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AA seq
412 aa
AA seq
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MKFLHTSDWHLGRSLYGRKRYAEFAAFLDWLGDTIEREYVDALLVAGDVFDTSTPSNRAQ
ELYYRFLNRVARSSCRHVVVIAGNHDSPSFLNAPKELLRALNVYVVGSMTEALEDEVFVL
QANDTPEVIVCAVPYLRDKDIRTVEPGETIDDKNAKLVEGLKTHYADVCAIAEQKRAEFK
SAGHDGIPIVATGHLFTAGGKTVDGDGVRELYVGSLAHVGEEVFPSSIDYLALGHLHVPQ
AVGSAEHIRYCGSPIPMGYGEATQEKKVVLVEFNSITPNIQELPVPCFQQLVRIVGSLDN
IHAKLEELKTEESSAWLEIEYTGSDIIGNLREMLDEAMADSAMEIRRIKNRRVMERVMST
IAEDETLDDLDAGDVFTRCLDTFEVPDEDRVELTVSYNEIIKDLREEDVNAE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctccatacctctgactggcatttgggtcgttctctttatggacggaagcgt
tacgctgagtttgctgcgtttcttgactggcttggcgacaccattgagcgggagtatgtt
gatgctcttctggttgccggcgatgtgttcgataccagcacgcccagcaacagggctcag
gaactctactatcgattcctcaatcgcgttgcccggtccagctgccgtcatgttgtcgtc
attgccgggaaccacgattcgccgtcatttctgaatgccccgaaggaactgctgcgagcg
ctcaatgtgtatgtggtgggctccatgaccgaagccttggaggatgaggtctttgtcctt
caagcaaatgatacgccggaggtcattgtttgcgctgtgccttatttacgggataaggat
atccgcacggtcgagccgggagaaactattgacgataaaaacgccaagctcgttgaagga
ttgaaaacccattacgcggatgtctgcgccattgccgaacagaaacgagccgaattcaaa
agtgccgggcatgatggtattcccatcgttgccacgggccacctcttcacggcaggcgga
aaaaccgttgacggtgatggtgtccgggagctttatgtgggatcgctagcacatgtcggt
gaggaggttttcccttcgtcaatcgattaccttgccctcggacatctgcacgttcctcag
gcggtcggaagtgcggagcacatccgctactgtggttcgcctattccgatgggctatggc
gaagcgactcaggaaaagaaggttgtgcttgttgagttcaacagtatcacgccaaatatc
caagagcttccagtaccgtgctttcagcaactggttcgcatcgtgggatctttggataat
atccatgcaaaattggaagagctgaaaacggaagaaagctctgcatggcttgagattgaa
tacaccggcagcgacatcatcggtaacctgcgcgagatgctcgatgaggccatggccgat
tcagccatggaaatccgccggatcaaaaacaggcgagtcatggagcgggtaatgagtacg
attgccgaagatgaaaccctcgatgatctggatgccggggatgtattcacccgctgtctg
gatacctttgaggtacccgatgaagaccgggtggaattgacggtctcctacaacgaaata
atcaaagatttgcgggaggaagatgtaaatgccgaataa
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