Pseudomonas viridinivis: AABC73_05460
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Entry
AABC73_05460 CDS
T11794
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pvii Pseudomonas viridinivis
Pathway
pvii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pvii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AABC73_05460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvii03021
]
AABC73_05460
Transcription machinery [BR:
pvii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AABC73_05460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_20
GerE
HTH_24
HTH_Crp_2
HTH_10
HTH_40
HTH_11
TnsD
HTH_38
Xre-like-HTH
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WZF12557
LinkDB
All DBs
Position
complement(1210703..1211206)
Genome browser
AA seq
167 aa
AA seq
DB search
MPIAHYAPNHTVEGLYNAHHNWLTTWLRRRLGCPHSAADLAQDTFVKVLLARDTAQIIEP
RAFLTTIAKRVLCNHYRRQDLERAYYQTLLEMPECVAPSEEDRAIILETLLELDQLLDGL
PILVKRAFLLAQIDGLSHGEIAGQLGISIATVKRHLHKAALRCYFAL
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcgcccactacgcgcccaatcacaccgtcgaaggcctgtataacgcccatcac
aactggctgacgacctggttacggcgccgactcggctgcccgcatagcgcggcggatctg
gcccaagacaccttcgtcaaggtgctgctggcccgggacacggcacagatcattgagcca
cgcgcctttctgaccacgattgccaaacgcgtgctgtgcaatcactaccgccgccaggat
ctggaacgcgcttattaccagacgctgctggaaatgccggaatgtgtcgcgccttccgaa
gaagatcgggcgatcattctggaaaccctgctggagctggatcagctgctcgatggcctg
cctattctggtcaagcgcgcgttcctgctggcgcagatcgacggcctgagccacggggaa
atcgccgggcaactggggatttccatcgccacggtcaaacgccatctgcacaaggccgcc
ctgcgctgctatttcgctctatga
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integrated database retrieval system
