Pseudomonas viridinivis: AABC73_06750
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Entry
AABC73_06750 CDS
T11794
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pvii Pseudomonas viridinivis
Pathway
pvii00300
Lysine biosynthesis
pvii01100
Metabolic pathways
pvii01120
Microbial metabolism in diverse environments
pvii01230
Biosynthesis of amino acids
Module
pvii_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pvii00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AABC73_06750 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvii01002
]
AABC73_06750 (dapE)
Enzymes [BR:
pvii01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
AABC73_06750 (dapE)
Peptidases and inhibitors [BR:
pvii01002
]
Metallo peptidases
Family M20
AABC73_06750 (dapE)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Fe_hydrogense_Fe-S_bd
Motif
Other DBs
NCBI-ProteinID:
WZF12798
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Position
complement(1494819..1495970)
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AA seq
383 aa
AA seq
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MTAPAELSPTLQLACDLIRRPSVTPIDADCQAVMMQRLGDAGFKLEPMRIEDVDNFWASH
GSSEGPVLCFAGHTDVVPTGPVNAWQNDPFDALIDADGMLCGRGAADMKGSLAAMLVAAE
RFVGDHPNHKGSIAFLITSDEEGPAHHGTKAVVEILKARNERMDWCIVGEPSSTTLVGDV
VKNGRRGSLGATLTVRGKQGHVAYPHLARNPIHLAAAALAELAAEHWDEGNAFFPPTSFQ
ISNLNSGTGATNVIPGELVAIFNFRFSTESTVEGLKQRVATILDKHELDWHVDWALSGLP
FLTEPGDLLDAVSDSIRAVTGRETKASTSGGTSDGRFIATMGTQVVELGPVNATIHQVNE
RVLASDLDVLTEIYYQTLVKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccagccgaactttcgcccactcttcaactcgcctgcgacctgatccgtcgt
ccttcggtgacacctatcgatgccgactgtcaggcagtgatgatgcaacgcctgggcgat
gccggcttcaagctggagccgatgcgtatcgaggatgtggataacttctgggccagccat
ggcagcagtgaaggtccggtcctgtgtttcgccgggcataccgacgtagtgcctaccgga
ccggtgaacgcctggcagaatgacccgttcgacgccttgatagatgctgacggcatgctc
tgcggccgtggcgcggcggacatgaaaggcagcctcgcggcgatgctggtggcggccgaa
cggtttgtcggtgatcacccgaaccacaaaggctcgattgcctttctgattaccagcgac
gaagaaggcccggcgcatcacggcaccaaagccgtggtggaaatcctcaaggcgcgcaac
gagcgcatggactggtgcattgtcggcgaaccgtcgagtaccacgctggtcggcgacgtc
gtgaagaacggtcggcgcggctctctcggcgcaaccctgaccgtgcgcggcaaacaaggt
cacgtggcctatccgcatctggcgcgcaatccgattcacctggccgctgcggcgctggcc
gaactggccgccgagcattgggacgaaggcaatgcattcttcccgccaacgagtttccag
atctccaacctgaattccggcaccggcgcgaccaacgtgatccccggtgagttggtggcg
atcttcaacttccgtttctccaccgaatccacggtcgaaggcttgaagcagcgggtcgcg
accatcctcgacaagcatgagctggactggcacgtggactgggcgctgtccggtctgcca
ttcctgaccgagccgggtgatttgctggacgcggtgtccgacagcattcgcgcggttacc
ggtcgcgagaccaaggcgtccaccagcggcgggacttccgatggtcgcttcattgccacc
atgggcacccaggttgtcgagctgggaccggtcaacgcgaccattcaccaggtcaacgaa
cgcgtgctggccagcgatctcgacgtgctgactgaaatctactatcagaccctggtcaaa
ctgctcgcatga
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