Pseudomonas viridinivis: AABC73_26955
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Entry
AABC73_26955 CDS
T11794
Symbol
dgcB
Name
(GenBank) dimethylglycine demethylation protein DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
pvii Pseudomonas viridinivis
Pathway
pvii00260
Glycine, serine and threonine metabolism
pvii01100
Metabolic pathways
Module
pvii_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pvii00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AABC73_26955 (dgcB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_10
Fer4_8
Fer4_9
Fer4_17
Fer4_6
Fer4_16
Fer4_2
Fer4
Fer4_4
Fer4_7
Fer4_21
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
WZF11143
LinkDB
All DBs
Position
complement(5770602..5772548)
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AA seq
648 aa
AA seq
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MLNTLLPILLFAALGLAVLGAVRRVRMWRNGRASAVDLLGGLLAMPKRYMVDLHHVVARD
KYIANTHVATAGGAVASIALAILVHGFGLHNRILGFALLIASAAMFGGAIFMYLRRINPP
ARLSKGPWMRLPKSLLAFSASFFLLTLPVAGILPENFGGWVLAAILGVGVLWGVCELFLG
MTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKPLDLNDKTAPLGVEKPKDFTWNQLL
GFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAHFAGSAYPGKKIGEHSG
NPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEV
LENLIATDNPGGFAPGGRMNWAADLNLNLLSDKQSVDVLFWVGDGAFDMRNQRTLRAFVK
VLKAAKVDFAVLGLEERDSGDVARRLGDEATFQMLAKRNIQTLAKYSFKRIVTCDPHSFH
VLKNEYGAFGGNYLVQHHSTYMAELIQAGALNLGQHKGSSVTYHDPCYLGRYNGEYEAPR
DVLRALGIEIKEMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMEDIRETGAELVAVGC
PQCTAMLEGVVEPRPLIKDIAELVADALLEEVIPSKPAPIKREPAEVH
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacactcttctccccatcctgctgttcgccgccctgggccttgctgtcctcggc
gcggtgcggcgggtaagaatgtggcgcaacggccgagcctcggcagtcgatctgctcggc
ggtctgctggccatgcccaaacgctacatggtcgatctgcaccatgtggtggctcgcgat
aaatacatcgccaacactcacgtcgccacggctggcggcgcggtggcgtccattgcgctg
gcgattctggtgcacggtttcggcctgcataaccgcattctcggcttcgcgctgttgatt
gcttcggcggcgatgttcggcggcgcgatcttcatgtatctgcgtcggatcaacccgcca
gcccgcctgtccaaaggcccgtggatgcgcttgccgaaaagcctgctggcgttctcggcg
agtttcttcctgttgaccttgccggtggcgggcatccttccggaaaacttcggaggttgg
gtattggcggcgattctgggcgtcggcgtgctgtggggcgtctgcgaattattcctcggc
atgacttggggcgggccgatgaagcacgccttcgcgggcgctttgcacctggcctggcac
cgtcgcgccgagcgtttcggcggtggtcgttccaccggcctcaagccgctggacctgaac
gacaagaccgcaccgctgggcgtggaaaaacccaaggatttcacctggaaccaactgctc
ggttttgacgcctgcgtgcagtgcggcaagtgcgaagccgcctgcccggcgttcgccgcc
ggtcagccgctgaacccgaaaaagcttattcaagacatggtcgtcggcctggcgggcggc
accgacgcgcacttcgctggcagtgcctatccggggaaaaaaattggtgagcacagcggc
aatccccatcaacccatcgtcaacggtctggtggatgccgagaccttgtggtcgtgcacc
acctgccgcgcgtgcgtcgaagaatgcccgatgatgatcgagcatgtggacgccatcgtc
gacatgcgccgccatctgaccctggaaaaaggcgcgaccccgaacaagggcgccgaagtc
ctggaaaacctgatcgccaccgacaaccccggcggttttgcgccgggcgggcggatgaac
tgggcggcggatttgaacctgaatctgctcagcgacaagcaatccgtcgacgtgctgttc
tgggtcggcgacggcgcgttcgacatgcgcaatcagcgtaccttgcgcgcgttcgtcaaa
gtcctcaaagcggcgaaagtggactttgccgtgcttggcctggaagagcgcgacagcggc
gatgtggctcgtcgtctgggtgatgaagcgaccttccagatgctcgccaaacgcaacatc
cagaccctggccaaatacagcttcaagcgcatcgtcacctgcgatccgcacagctttcat
gtgctgaaaaacgagtacggtgcgttcggcggcaactacctcgtgcagcaccacagcacg
tatatggccgaactgatccaggccggcgcgctgaatctgggccagcacaaaggcagcagc
gtgacctatcacgatccgtgttatctgggccgctacaacggcgagtacgaagcgccgcgt
gatgtgctgcgtgcgctgggcatcgagatcaaggaaatgcagcgttccggtttccgctcg
cgctgctgcggcggtggcggcggtgcgccgatcacggacattcccggcaagcagcggatt
cccgacatgcgtatggaagacatccgcgaaaccggcgccgaactggtggccgtgggttgt
ccgcaatgcacggcgatgctcgaaggcgtggtcgaaccgcgtccgctgatcaaggacatt
gccgaactggtcgccgacgcgctgttggaagaagttatccccagcaagcccgcaccgatc
aaacgtgaacctgcggaggtgcattga
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