Panicum virgatum (switchgrass): 11123560
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Entry
11123560 CDS
T07260
Symbol
petA, PVIS_g033
Name
(RefSeq) cytochrome f
KO
K02634
apocytochrome f
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00195
Photosynthesis
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00195 Photosynthesis
11123560 (petA)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
pvir00194
]
11123560 (petA)
Photosynthesis proteins [BR:
pvir00194
]
Photosystem and electron transport system
Cytochrome b6/f complex [OT]
11123560 (petA)
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Gene cluster
GFIT
Motif
Pfam:
Apocytochr_F_N
Apocytochr_F_C
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
11123560
NCBI-ProteinID:
YP_004841961
UniProt:
G3EFE0
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Position
Pltd:60747..61709
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AA seq
320 aa
AA seq
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MENRNTFSWLKEQMIRSISVSIMIYVITRTSISNAYPIFAQQGYENPREATGRIVCANCH
LANKPVDIEVPQAVLPDTVFEAVLRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAP
PDRISPELKEKIGNLSFQSYRPNKKNILVIGPVPGKKYSEIVFPILSPDPATKKDVHFLK
YPIYVGGNRGRGQIYPDGSKSNNTVYNATSTGIVKKILRKEKGGYEISIVDASDGRQVID
IIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQ
VFLVLKKKQFEKVQLYEMNF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatagaaatactttttcttggttaaaggaacagatgattcgatcgatttctgta
tcgatcatgatatacgtaataactcgcacatctatttcaaatgcatatcccatttttgcg
cagcagggttatgaaaacccacgggaagcaactggacgaattgtatgtgccaattgccat
ttagctaataagcctgtggatattgaggtcccccaagcagtgcttcctgatactgtattt
gaagcagttcttcgaatcccttatgatatgcagctgaaacaagttcttgctaatggtaaa
aagggagggttgaatgtgggtgctgttcttattttgcccgagggattcgaattagcgccg
cccgaccgtatttctcctgagttgaaagaaaagataggaaatctctcttttcagagttat
cgtcccaataaaaaaaatattcttgtgataggccctgttcccggtaagaaatatagtgaa
attgtctttcccattctttcccccgatcccgctacgaaaaaagacgttcatttcttaaaa
tatcccatatatgtagggggaaaccgaggaaggggacagatctatcctgatggtagcaag
agtaacaatacggtctataatgctacgtcaacaggtatagtaaaaaaaatactacgtaaa
gaaaaggggggatatgaaatatccatagtcgatgcgtcggatggacgccaagtgattgat
attatacctcccgggccagaacttctagtttcagagggggaatcgattaagctggatcaa
ccattaacaagcaatcctaatgtcggagggtttggtcagggggatgcagaaatagtgctt
caggatccattgcgcgtccaaggccttttgttcttcttcgcatctgttattttggcacaa
gtttttttggttctcaaaaagaaacagtttgaaaaggttcaattgtacgaaatgaatttc
tag
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