Panicum virgatum (switchgrass): 120639149
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Entry
120639149 CDS
T07260
Name
(RefSeq) cellulose synthase-like protein D3
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120639149
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120639149
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_trans_2_3
zf-UDP
Motif
Other DBs
NCBI-GeneID:
120639149
NCBI-ProteinID:
XP_039771109
LinkDB
All DBs
Position
6K:26687341..26691175
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AA seq
1142 aa
AA seq
DB search
MSNPPPKKAIRNPGPGGGGPAAGGSRGPAAPGNTVKFARRTPSGRYVSLSREDIDMEGEL
GADYANYTVHIPPTPDNQPMMDGAEPASVAMKAEEQYVSNSLFTGGFNSVTRAHLMDKVI
ESDVSHPQMAGSKGASRCGMPACDGKVMRTERGEEMYPCECRFKICRDCYLDAQKDGCLC
PGCKEHYKIGEYADDDPADGKHYLPGPGGMNTSKSLLARNQNGEFDHNQWLFESSGTYGY
GNAYWPKGGMYDDDLDDEGGGGGGGAGDLPEQKPFKPLTRKLPMPTSIISPYRIFIVIRM
FVLLFYLTWRIQNPNMEALWLWGMSIVCELWFAFSWLLDMLPKVNPVNRSTDLSVLKEKF
ETPSPSNPHGRSDLPGLDVFVSTADPEKEPVLTTATTILSILAADYPVEKLACYVSDDGG
ALLTFEAMAEAASFANMWVPFCKKHDIEPRQPDSYFALKGDPTKGKRRSDFVKDRRKVKR
EFDEFKVRINGLPDSIRRRSDAFNAREDMKMLKHLRESGADPAEQPKVKKATWMADGTHW
PGTWAASAPDHAKGNHAGILQVMLKPPSPDPLYGMHDEEQIIDFSDVDIRLPMLVYMSRE
KRPGYDHNKKAGAMNALVRCSAVMSNGPFILNFDCDHYINNAQAIREAMCFVMDRGGERI
AYIQFPQRFEGIDPSDRYANNNTVFFDGNMRALDGLQGPMYVGTGCMFRRFALYGFDPPR
TTEYTGWLFNKKKVTSFKADPETDTQSLKAEDFDAELTSMLVPRRFGNSSALMASIPVAE
FQARPLADHPAVRHGRPPGALTVPRPPLDPPTVAEAVSVISCWYEDKTEWGDRVGWIYGS
VTEDVVSGYRMHNRGWRSVYCIPKRDAFLGTAPINLTDRLHQVLRWATGSVEIFFSRNNA
FLASRRLMFLQRVAYLNVGIYPFTSIFLLVYCFIPALSLFSGFFIVQTLNVAFLCYLLTI
TVTLIALGVLEVKWSGIALEDWWRNEQFWLISGTSAHLYAVVQGLLKVMAGIEISFTLTA
KAAADDNEDIYADLYVVKWSSLLIPPITIGMINIIAIAFAFARTVYSDNPRWGKFIGGGF
FSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLISITISLLWVAISPPEASAGGRTAGFQ
FP
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacccaccgccgaagaaggcgatccggaaccccggccccggcggcggcgggccg
gcggcgggcggctcccgggggccggcggcgccggggaacacggtgaagttcgcgcggcgg
accccgagcgggcggtacgtgagcctgtcgagggaggacatcgacatggagggcgagctc
ggcgcggactacgccaactacacggtgcacatcccgccgacgcccgacaaccagccgatg
atggacggcgccgagccggcgtccgtggccatgaaggccgaggagcagtacgtctccaac
tcgctcttcaccggcggcttcaacagcgtcacgcgcgcccacctgatggacaaggtcatc
gagtccgacgtcagccacccgcagatggccggctccaagggcgcctcccgctgtggcatg
cccgcctgcgacggcaaggtcatgcgcacggagcgcggcgaggagatgtacccctgcgag
tgccgcttcaagatctgccgcgactgctacctggacgcgcagaaggacgggtgcctctgc
ccgggctgcaaggagcactacaagatcggcgagtacgccgacgacgaccccgccgacggt
aagcactacctgccggggccgggcggcatgaacaccagcaagtccctgctggcgcggaac
cagaacggcgagttcgaccacaaccagtggctcttcgagagctcggggacctacggctac
ggcaacgcgtactggcccaagggcggcatgtacgacgacgacctggacgacgagggcggc
ggcggaggcggcggcgccggcgacctcccggagcagaagccgttcaagccgctgacgcgc
aagctgcccatgccgacgtccatcatcagcccgtaccggatcttcatcgtgatccggatg
ttcgtgctcctcttctacctgacgtggcgcatccagaaccccaacatggaggcgctgtgg
ctgtggggcatgtccatcgtgtgcgagctctggttcgccttctcctggctgctggacatg
ctccccaaggtgaaccccgtgaaccggagcacggacctgagcgtgctcaaggagaagttc
gagacgccgtcgccgtccaacccgcacgggcggtccgacctgccggggctggacgtgttc
gtgtccacggccgacccggagaaggagccggtgctcaccacggccaccaccatcctgtcc
atcctggcggcggactacccggtggagaagctggcgtgctacgtgtcggacgacggcggc
gcgctgctcaccttcgaggccatggcggaggcggcgagcttcgccaacatgtgggtgccc
ttctgcaagaagcacgacatcgagccccggcagccggacagctacttcgcgctcaagggc
gacccgaccaagggcaagcggcggtcggacttcgtcaaggaccggcgcaaggtgaagcgg
gagttcgacgagttcaaggtgcgcatcaacggcctgccggactccatccgccggcgctcc
gacgcgttcaacgcccgcgaggacatgaagatgctcaagcacctccgcgagagcggcgcc
gacccggcggagcagcccaaggtgaagaaggcgacgtggatggccgacggcacgcactgg
ccgggcacctgggcggcgtcggcccccgaccacgccaagggaaaccacgccggcatcctg
caggtgatgctcaagccgccgtcgccggaccccctgtacgggatgcacgacgaggagcag
atcatcgacttcagcgacgtggacatccgcctgccgatgctggtgtacatgtcccgcgag
aagcgccccggctacgaccacaacaagaaggccggcgccatgaacgccctggtgcgctgc
tccgccgtcatgtccaacgggcccttcatcctcaacttcgactgcgaccactacatcaac
aacgcgcaggccatccgcgaggccatgtgcttcgtcatggaccgcggcggcgagcgcatc
gcctacatccagttcccgcagcgcttcgagggcatcgacccctccgaccgctacgccaac
aacaacaccgtcttcttcgacggcaacatgcgcgccctcgacggcctccagggccccatg
tacgtcggcaccggctgcatgttccgccgcttcgcgctctacggcttcgacccgccgcgc
accaccgagtacaccggctggctcttcaacaagaagaaggtgacgtccttcaaggccgac
ccggagacggacacgcagtcgctcaaggccgaggacttcgatgcggagctgacatcgatg
ctggtgccccggcggttcggcaactcgtcggcgctcatggcgtccatcccggtggccgag
ttccaggcgcggccgctggcggaccacccggccgtgcggcacgggaggccccccggcgcg
ctcaccgtgccccgcccgccactggacccgccgacggtggcggaggccgtgtcggtcatc
tcgtgctggtacgaggacaagacggagtggggcgaccgggtggggtggatctacggctcc
gtgaccgaggacgtggtgagcggctaccgcatgcacaaccgcgggtggcgctccgtgtac
tgcatccccaagcgcgacgcgttcctgggcacggcgcccatcaacctgacggaccggctg
caccaggtgctgcgctgggccacggggtcggtggagatcttcttctcccggaacaacgcc
ttcctggcgtcgcggaggctcatgttcctgcagcgggtggcctacctcaacgtcggcatc
taccccttcacctccatcttcctgctcgtctactgcttcatcccggcgctgtccctcttc
tcgggcttcttcatcgtgcagacgctcaacgtggcgttcctctgctacctgctcaccatc
accgtcacgctcatcgcgctcggcgtgctcgaggtcaagtggtccggcatcgcgctcgag
gactggtggcggaacgagcagttctggctaatctcaggaaccagcgcgcacctgtacgcg
gtggtgcagggcctgctcaaggtgatggccgggatcgagatctccttcacgctcacggcc
aaggcggcggcggacgacaacgaggacatctacgccgacctctacgtggtcaagtggtcc
tcgctgctcatcccgcccatcaccatcggcatgatcaacatcatcgccatcgccttcgcc
ttcgcgcgcaccgtctacagcgacaacccgaggtgggggaagttcatcggcggcggcttc
ttcagcttctgggtgctggcgcacctctaccccttcgccaaggggctcatgggccgccga
ggcaagacgcccaccatcgtcttcgtctggtcgggcctcatctccatcaccatctccctg
ctctgggtcgccatcagcccgccggaggcctctgccggcggacgcactgcgggcttccag
ttcccctga
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